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Doc: Add table with AMICI C++/Python/Matlab feature comparison#1409

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dweindl merged 7 commits intodevelopfrom
doc_interface_features
Feb 16, 2021
Merged

Doc: Add table with AMICI C++/Python/Matlab feature comparison#1409
dweindl merged 7 commits intodevelopfrom
doc_interface_features

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@dweindl dweindl commented Feb 11, 2021

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codecov bot commented Feb 11, 2021

Codecov Report

Merging #1409 (533937e) into develop (9f8fbd8) will increase coverage by 0.05%.
The diff coverage is n/a.

Impacted file tree graph

@@             Coverage Diff             @@
##           develop    #1409      +/-   ##
===========================================
+ Coverage    78.73%   78.79%   +0.05%     
===========================================
  Files           66       66              
  Lines        10061    10061              
===========================================
+ Hits          7922     7928       +6     
+ Misses        2139     2133       -6     
Flag Coverage Δ
cpp 75.39% <ø> (+0.08%) ⬆️
petab 69.48% <ø> (ø)
python 67.72% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/solver_cvodes.cpp 70.41% <0.00%> (+0.20%) ⬆️
src/sundials_matrix_wrapper.cpp 84.25% <0.00%> (+0.63%) ⬆️
src/exception.cpp 91.30% <0.00%> (+8.69%) ⬆️

dweindl and others added 2 commits February 11, 2021 22:33
Co-authored-by: Fabian Fröhlich <fabian_froehlich@hms.harvard.edu>
@dweindl dweindl requested a review from FFroehlich February 11, 2021 22:32
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Kudos, SonarCloud Quality Gate passed!

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
No Duplication information No Duplication information

@dweindl dweindl merged commit ec8d8d8 into develop Feb 16, 2021
@dweindl dweindl deleted the doc_interface_features branch February 16, 2021 20:32
@dweindl dweindl mentioned this pull request Feb 19, 2021
dweindl added a commit that referenced this pull request Feb 20, 2021
….13)

Breaking changes:
* AMICI requires Python>=3.7
* Updated package installation (PEP517/518): 
  Creating source distributions requires https://github.com/pypa/build (#1384)
  (but now handles all package building dependencies properly)

Features:
* More flexible state reinitialization (#1417)

Updated dependencies:
* Upgrade to sundials 5.7.0 (#1392)

Fixes:
* Python: account for heaviside functions in expressions (#1382)
* Python: allow loading of existing models in import_petab_problem (#1383)
* Python: Don't override user-provided compiler/linker flags (#1389)
* Python: PEtab import reinitialization fixes (#1417)
* Python: Fix PEtab observables for pysb models (#1390)
* Python: Substitute expressions in event condition expressions (#1404)
* Python: Unspecified initial states in PEtab conditions table default to SBML initial value (#1397)
* C++: Fix timepoint out of bounds access (#1402)
* C++: Fix exported CMake config (#1388)
* Fixed Dockerfile: add python3-venv (#1398, #1408)

Other:
* Slim exported swig interface (#1425)
* Updated documentation
    * Getting started tutorial (#1423)
    * List supported SBML test tags (#1428)
    * Add AMICI C++/Python/Matlab feature comparison (#1409)
    * ...
* Various minor CI improvements
* ...
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