Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5
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Mar 12, 2026 - Rust
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phylogenetics
Here are 19 public repositories matching this topic...
An ultrafast and memory efficient tool for phylogenomics
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Apr 17, 2026 - Rust
Drawing reconciled phylogenetic trees allowing 1, 2 or 3 reconcillation levels
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Oct 24, 2025 - Rust
phylo2vec: a library for vector-based phylogenetic tree manipulation
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May 11, 2026 - Rust
Light phylogeny library for Rust
svg rust phylogenetic-trees phylogenetics newick phylogeny phyloxml recphyloxml horizontal-transfer reconciled-tree
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Oct 24, 2025 - Rust
TaxaGO: A Command-Line Tool for Phylogenetically-Aware Gene Ontology Enrichment Analysis
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Oct 17, 2025 - Rust
Myrio is a command-line tool for identifying plant taxonomy from mixed barcode gene reads. It can also estimate whether a sample is already represented or not in reference databases.
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Nov 15, 2025 - Rust
Ultra-fast SNP/indel-level distance calculator for core genome MLST analysis in bacterial genomics
rust bioinformatics genomics phylogenetics epidemiology mlst cgmlst snp-analysis food-safety outbreak-investigation bacterial-genomics recombination-flagging
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May 14, 2026 - Rust
Neighbor Joining in rust, with python and JS/WASM wrappers
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Apr 16, 2026 - Rust
A tool for phlyo tree, a phylogenetic tree construction software.
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Sep 9, 2024 - Rust
A smart concatenation tool to create supermatrices
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Mar 21, 2026 - Rust
Ultra-fast Minimum Spanning Tree construction from distance matrices — Rust rewrite of dist2mst (~900x faster)
rust bioinformatics genomics clustering high-performance phylogenetics newick minimum-spanning-tree distance-matrix
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Apr 15, 2026 - Rust
A lightweight tool to find clusters of samples within a phylogeny
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May 2, 2025 - Rust
Preserving, mining, and modernizing PHYLIP's algorithmic legacy — 35,805 lines of Rust, 1,050 tests, zero dependencies
rust bioinformatics algorithms evolution computational-biology phylogenetics phylip code-archaeology
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Feb 22, 2026 - Rust
Parallel implementation of CONSEL's AU test
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Mar 17, 2026 - Rust
Extract NEXUS partition blocks from a collection of concatenated alignments
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Mar 5, 2022 - Rust
A lightweight CLI toolkit for phylogenetic analysis
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May 12, 2026 - Rust
Rust implementation of hereditary stratigraphy for phylogenetic inference
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Mar 2, 2026 - Rust
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