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Issues list

Characterise propagation up the tree performance with seeking enhancement New feature or request Performance This issue addresses performance, either runtime or memory
#2792 opened Jul 12, 2023 by jeromekelleher
Garbage collection in ibd_segments, link_ancestors and simplify enhancement New feature or request Performance This issue addresses performance, either runtime or memory
#2461 opened Aug 10, 2022 by gtsambos
1
1
Deprecate the (new) _array methods by allowing both parent(u) and parent[u] access? Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#2015 opened Dec 5, 2021 by hyanwong Python 0.7
11
Cache metadata validation Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#1907 opened Nov 11, 2021 by jeromekelleher Python 0.7
3
Performance regression for full LD matrix C API Issue is about the C API Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#1905 opened Nov 10, 2021 by jeromekelleher
Making find_IBD more efficient by pruning ancestral segments Performance This issue addresses performance, either runtime or memory
#1636 opened Aug 18, 2021 by gtsambos
@gtsambos
1
Enumerated type in struct metadata codec enhancement New feature or request Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#632 opened May 22, 2020 by benjeffery
Struct codec perf enhancement New feature or request Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#614 opened May 13, 2020 by benjeffery Python 0.7
5
Add asv benchmarks to track performance enhancement New feature or request Infrastructure and tools Development infrastructure and tools Performance This issue addresses performance, either runtime or memory
#511 opened Apr 5, 2020 by benjeffery
10
Update tracked_samples to natively use numpy array. Performance This issue addresses performance, either runtime or memory Python API Issue is about the Python API
#64 opened Feb 2, 2018 by jeromekelleher Python upcoming
1
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