Machine Learning models for in vitro enzyme kinetic parameter prediction
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Apr 19, 2026 - Python
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enzyme-kinetics
Here are 35 public repositories matching this topic...
A Python parser for the BRENDA database
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Sep 15, 2023 - Python
🏍️ - JAX-based framework to model biological systems
simulation neural-networks bayesian-inference surrogate-based-optimization enzyme-kinetics enzymeml neural-odes
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May 21, 2026 - Python
Python toolkit and package for analyzing enzyme activity data
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Jun 17, 2022 - Jupyter Notebook
🔬 mtphandler is Python package for processing, enriching, and converting microtiter plate data into standardized EnzymeML time-course data, ready for data science
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Jan 14, 2026 - Python
LBplot is a python program to plot Lineweaver-Burk double reciprocal plots and calculate basic statistics from V0 and [S] data.
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Jun 10, 2020 - Python
A QM-MM Tutorial of Enzyme Reaction Dynamics
ambertools protein-ligand-interactions qm-mm vdd md-simulations terachem enzyme-kinetics nbo enzyme-reactions
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Apr 20, 2026 - Shell
A Python module for analysis and visualization of dose-response data
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Aug 15, 2024 - Python
Organize and analyze plate-reader data from 96-well plate kinetics experiments. Specifically tailored for PGO assays but can be modified to fit many more.
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Sep 5, 2020 - R
A computational tool for fitting Michaelis–Menten enzyme kinetics data using non-linear least squares regression. Features both a command-line interface for batch processing and an interactive web dashboard for real-time analysis.
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Dec 4, 2025 - Python
Stochastic chemical kinetics using Gillespie algorithm and chemical master equation, application to enzyme kinetics
enzyme computational-biology chemical-kinetics physical-chemistry stochastic-processes stochastic-simulation-algorithm chemical-reactions gillespie-algorithm michaelis-menten enzyme-kinetics chemical-master-equation
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Oct 30, 2023 - C++
Python toolkit for wet-lab assay data analysis and visualization — enzyme kinetics, qPCR, and SPR fitting helpers with a built-in GraphPad-Prism-style Matplotlib stylesheet for publication-ready plots.
python data-visualization biochemistry scipy data-analysis matplotlib qpcr spr enzyme-kinetics graphpad-prism
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May 2, 2025 - Python
A library for parsing out data from the BRENDA database html files
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Feb 4, 2021 - HTML
This study explores morph-specific differences in gene expression and steroid hormone metabolism in ruff sandpipers (Calidris pugnax), focusing on the key enzyme HSD17B2.
neurobiology transcriptomics molecular-biology endocrinology molecular-genetics enzyme-kinetics intraspecific-variability
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Feb 4, 2025 - R
Generation of 3 types of Enzyme Kinetics plots, including double reciprocal, using R to reduce manual labour, from raw lab data. We are using ALP as a model enzyme.
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May 19, 2026 - R
Enzyme kinetics fitting tools — simple Michaelis-Menten fitter (Dash) and advanced multi-model Bayesian fitter with ODE integration (Streamlit/PyMC)
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Apr 26, 2026 - Python
R package designed to generate, distribute, and evaluate enzyme kinetics data for teaching and assessment in biochemistry and related laboratory courses.
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Mar 15, 2026 - R
A library for generalized kinetics format
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May 5, 2021 - Modelica
🧬 - A graphical user interface for the EnzymeML community standard
rust database research-data-management metadata-extraction graphical-user-interface tauri enzymes typescript-react enzyme-kinetics large-language-models
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Mar 11, 2026 - TypeScript
MSc thesis submitted to University of Hertfordshire
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Oct 7, 2024 - TeX
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