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@jvwong jvwong commented Oct 13, 2020

  • Major updates

    • Warn user when when entity from > 1 organism
    • Disable submit for empty doc
  • Minor updates

    • generate network images on change
    • Indra retries
    • Admin updates

jvwong and others added 26 commits October 5, 2020 14:52
Refs. : Document post-mortem: Missing metadata and misc problems #851
- Increase the number of retries.
- Add a random delta so that different queries don't tend to come in at the same time.

Refs. : Document post-mortem: Missing metadata and misc problems #851
Take into account `lastEditedDate` in the document image cache
- Make the organism name salient (at the top) in the grounding popover.
- Add `ent.organism()` shortcut function to get the `Organism` an `Entity` is grounded to (may be null for chemical).
- Add `doc.commonOrganism()` to get the most common `Organism` in a `Document` -- may be null in the case of a tie.
- Add `doc.irregularOrganismEntities()` to get an array of entities that are grounded to an organism other than the common one.

Refs. :

- Grounding: Entity organism preference / mixed organisms for genes #861
- Block users from submitting empty documents #860
More salient organism in entity grounding popover
- Create task list component
- Add components for closing tooltip on click
E.g. while typing 'smad3':

(1) You probably type 'smad' quickly.  That's one query.  The node is now grounded to smad9 (mouse).
(2) You now add '3'.  The grounding is now for smad3 mouse instead of human, because (1) added a bias to mouse.
- Use `ns:id` as ID.
- Use `value` instead of `defaultValue`.  React doesn't use `defaultValue` properly.
…1_irregular-org

Iss860 empty submit iss861 irregular org
…email

Admin: Email disabling, spinner and large page width
@jvwong jvwong requested a review from maxkfranz October 13, 2020 14:09
@maxkfranz
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I'd like to include #871

@jvwong
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jvwong commented Oct 13, 2020

I'd like to include #871

OK lemme look right now...

@maxkfranz
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OK, this PR just needs to pull in the latest from unstable and retag

@jvwong jvwong merged commit 8fdabfd into master Oct 13, 2020
@jvwong jvwong deleted the v0.12.0 branch October 13, 2020 17:51
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3 participants