now build hdf5-1.10.7 from source for testing

.github/workflows/netcdf-4.7.4.yml

@@ -0,0 +1,184 @@
+name: esmf-8.0.1_jasper-2.0.22_nceplibs-develop
+on: [push, pull_request]
+
+jobs:
+  build:
+    runs-on: ${{ matrix.os }}
+    env:
+      CC: gcc-9
+      FC: gfortran-9
+      CXX: g++-9
+    strategy:
+      matrix:
+        os: [macos-10.15, ubuntu-20.04]
+        compiler: [gcc-9]      
+
+    steps:
+    - name: cache-mpich
+      id: cache-mpich
+      uses: actions/cache@v2
+      with:
+        path: ~/mpich
+        key: mpich-${{ runner.os }}-3.3.2-1
+
+    - name: build-mpich
+      if: steps.cache-mpich.outputs.cache-hit != 'true'
+      run: |
+        if [[ ${{ matrix.os }} == "macos-10.15" ]]; then
+          wget http://www.mpich.org/static/downloads/3.3.2/mpich-3.3.2.tar.gz &> /dev/null
+          tar -xzf mpich-3.3.2.tar.gz
+          pushd mpich-3.3.2
+          ./configure --prefix=$HOME/mpich
+          make
+          sudo make install
+          popd
+        fi
+
+    - name: install-dependencies
+      run: |
+        echo "/home/runner/mpich/bin" >> $GITHUB_PATH
+        if [[ ${{ matrix.os }} == "ubuntu-20.04" ]]; then
+          sudo apt-get update
+          sudo apt-get install libmpich-dev
+          sudo apt-get install doxygen
+          sudo apt-get install libnetcdf-dev libnetcdff-dev netcdf-bin pkg-config
+          sudo apt-get install libpng-dev
+          sudo apt-get install libjpeg-dev
+        elif [[ ${{ matrix.os }} == "macos-10.15" ]]; then
+          echo "$HOME/mpich/bin" >> $GITHUB_PATH
+          brew update
+          brew install doxygen
+          brew install mpich
+          brew install netcdf
+          brew install wget
+          if [[ ${{ matrix.compiler }} == "gcc-9" ]]; then
+            sudo ln -sf /usr/local/bin/gfortran-9 /usr/local/bin/gfortran
+          elif  [[ ${{ matrix.compiler }} == "gcc-10" ]]; then
+            sudo ln -sf /usr/local/bin/gfortran-10 /usr/local/bin/gfortran
+          fi
+        fi
+        python3 -m pip install gcovr
+
+    - name: cache-esmf
+      id: cache-esmf
+      uses: actions/cache@v2
+      with:
+        path: ~/esmf
+        key: esmf-${{ runner.os }}-8.0.1-2
+
+    - name: build-esmf
+      if: steps.cache-esmf.outputs.cache-hit != 'true'
+      run: |
+        set -x
+        pushd ~
+        export ESMF_DIR=~/esmf-ESMF_8_0_1
+        wget https://github.com/esmf-org/esmf/archive/ESMF_8_0_1.tar.gz &> /dev/null && ls -l
+        tar zxf ESMF_8_0_1.tar.gz && ls -l
+        cd esmf-ESMF_8_0_1
+        export ESMF_COMM=mpich3
+        export ESMF_INSTALL_BINDIR=bin
+        export ESMF_INSTALL_LIBDIR=lib
+        export ESMF_INSTALL_MODDIR=mod
+        export ESMF_COMPILER=gfortran
+        export ESMF_INSTALL_PREFIX=~/esmf
+        export ESMF_NETCDF=split
+        if [[ ${{ matrix.os }} == "ubuntu-20.04" ]]; then 
+          export ESMF_NETCDF_INCLUDE=/usr/include
+          export ESMF_NETCDF_LIBPATH=/usr/x86_64-linux-gnu
+        elif [[ ${{ matrix.os }} == "macos-10.15" ]]; then
+          export ESMF_NETCDF_INCLUDE=/usr/local/include
+          export ESMF_NETCDF_LIBPATH=/usr/local/lib
+        fi
+        make -j2
+        make install
+
+    - name: cache-jasper
+      id: cache-jasper
+      uses: actions/cache@v2
+      with:
+        path: ~/jasper
+        key: jasper-${{ runner.os }}-2.0.22
+
+    - name: build-jasper
+      if: steps.cache-jasper.outputs.cache-hit != 'true'
+      run: |
+        set -x
+        pwd
+        wget https://github.com/jasper-software/jasper/archive/version-2.0.22.tar.gz &> /dev/null && ls -l
+        tar zxf version-2.0.22.tar.gz && ls -l
+        cd jasper-version-2.0.22
+        mkdir build-jasper && cd build-jasper
+        cmake .. -DCMAKE_INSTALL_PREFIX=~/jasper
+        make -j2
+        make install
+
+    - name: cache-hdf5
+      id: cache-hdf5
+      uses: actions/cache@v2
+      with:
+        path: ~/hdf5
+        key: hdf5-${{ runner.os }}-1.10.7-mpich-3.3.2
+
+    - name: build-hdf5
+      if: steps.cache-hdf5.outputs.cache-hit != 'true'
+      run: |
+        set -x
+        export CC=mpicc
+        wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.7/src/hdf5-1.10.7.tar.gz &> /dev/null
+        tar -xzf hdf5-1.10.7.tar.gz
+        pushd hdf5-1.10.7
+        ./configure --prefix=${HOME}/hdf5 --enable-parallel --disable-tools --disable-fortran --disable-cxx --enable-parallel-tests
+        make
+        sudo make install
+        popd
+
+
+    - name: checkout-nceplibs
+      uses: actions/checkout@v2
+      with:
+        repository: NOAA-EMC/NCEPLIBS
+        path: nceplibs
+
+    - name: get-git-hash
+      run: |
+        cd nceplibs
+        git rev-parse HEAD > hash.txt
+
+    - name: cache-nceplibs-develop
+      id: cache-nceplibs-develop
+      uses: actions/cache@v2
+      with:
+        path: ~/nceplibs
+        key: nceplibs-develop-${{ runner.os }}-${{ hashFiles('nceplibs/hash.txt') }}
+
+    - name: build-nceplibs
+      if: steps.cache-nceplibs-develop.outputs.cache-hit != 'true'
+      run: |
+        set -x
+        export ESMFMKFILE=~/esmf/lib/esmf.mk
+        cd nceplibs
+        mkdir build && cd build
+        cmake .. -DCMAKE_PREFIX_PATH='~;~/jasper' -DCMAKE_INSTALL_PREFIX='~/nceplibs' -DFLAT=ON
+        make -j2
+
+    - name: checkout-ufs-utils
+      uses: actions/checkout@v2
+      with: 
+        path: ufs_utils
+
+    - name: build-ufs-utils
+      run: |
+        export ESMFMKFILE=~/esmf/lib/esmf.mk
+        cd ufs_utils
+        mkdir build && cd build
+        cmake .. -DCMAKE_PREFIX_PATH='~/jasper;~/nceplibs' -DENABLE_DOCS=On -DCMAKE_Fortran_FLAGS="-g -fprofile-arcs -ftest-coverage -O0"
+        make -j2
+        make test
+        export PATH="/home/runner/.local/bin:$PATH"
+        gcovr -r .. --html-details -o test-coverage.html
+
+    - uses: actions/upload-artifact@v2
+      if: ${{ matrix.os == 'ubuntu-20.04' }}
+      with:
+        name: test-coverage
+        path: ufs_utils/build/*.html