sequence-conservation

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Here are 5 public repositories matching this topic...

d8vela / ColabSeq

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ColabSeq: The one-stop shop for all of your multiple sequence analysis needs.

Updated Sep 22, 2026
Jupyter Notebook

cmzmasek / blastp-search

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Per-taxonomy BLASTP search tool for balanced sequence retrieval from NCBI

python bioinformatics proteins computational-biology phylogenetics blast bacteria blastp protein-analysis sequence-similarity sequence-conservation

Updated Apr 22, 2026
Python

OcMalde / fuse-phylotree

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FUSE-PhyloTree enables to identify sequence conservation modules and associate them with functional annotations through phylogenomic analysis.

phylogenetic-trees protein-sequences protein-protein-interaction protein-functional-regions phylogenetic-analysis protein-function sequence-conservation

Updated Oct 30, 2025
Python

terravic / protein-sequence-msa-visualize-skill

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Agent skill for protein multiple sequence alignment (MSA) via EMBL-EBI Clustal Omega, Shannon entropy conservation analysis, functional site coordinate projection, and interactive HTML5 dashboard visualization.

Updated Oct 6, 2026
Python

sermare / carP-encoding-a-Ca2--regulated-putative-phytase

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Here, we studied the conservation of carP sequence and its occurrence in diverse phylogenetic groups of bacteria. In silico analysis revealed that carP and its two paralogues PA2017 and PA0319 are primarily present in P. aeruginosa and belong to the core genome of the species.

biomarker-discovery sequence-conservation pseudomonas cystic-fibrosis calcium-network putative-phytase

Updated Mar 13, 2022
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