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Commits on Feb 17, 2022

• Updated the version year to 2022.

  whitwham

  committed
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Commits on Nov 30, 2021

• Add new bcftools head command

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  jmarshall

  committed
  a79e1aa

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Commits on Nov 10, 2021

• Advertise plugins on the usage page

  pd3

  committed
  dc009e5

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Commits on Mar 9, 2021

• Happy New Year!

  pd3

  committed
  67b23db

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Commits on Sep 18, 2020

• Update copyright.

  valeriuo

  committed
  37dcee9

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Commits on Jul 23, 2020

• Rename bam_mpileup() to avoid clash with samtools's equivalent

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  jmarshall

  committed
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Commits on Nov 28, 2019

• Update copyright date printed by --version option

  daviesrob

  committed
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Commits on Apr 15, 2019

• Build complete without plugins.

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  valeriuo

  committed
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• Windows/Mingw/MSYS support.

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  jkbonfield

  authored and

  valeriuo

  committed
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Commits on Jul 13, 2018

• Update copyright date printed by bcftools --version

  daviesrob

  committed
  c3c5569

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Commits on Jul 6, 2017

• New sort command

  pd3

  committed
  8fe6acd

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Commits on Jun 9, 2017

• Add configure options for plugins

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  daviesrob

  authored and

  mcshane

  committed
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Commits on Sep 2, 2016

• New bcftools/csq command, regidx overhaul and new %TBCSQ query format.

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  pd3

  committed
  85e11e2

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Commits on Aug 5, 2016

• add mpileup command to bcftools

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  mcshane

  committed
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Commits on Jan 11, 2016

• Happy New Year

  mcshane

  committed
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Commits on Oct 22, 2015

• cnv: New -k option, fixed non-functional parsing of -dfloat,float

  

  pd3

  authored and

  mcshane

  committed
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Commits on Jul 6, 2015

• Merge pull request samtools#286 from samtools/feature/polysomy

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  mcshane

  committed
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Commits on Jun 29, 2015

• show polysomy command in help message

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  mcshane

  committed
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Commits on Jun 15, 2015

• add version and help to the docs

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  mcshane

  committed
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Commits on Feb 2, 2015

• Happy New Year

  jmarshall

  committed
  11c5a68

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Commits on Oct 15, 2014

• Forgotten PSMY macros changed to new USE_GPL

  pd3

  committed
  3f2df5a

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• Print "This is free software [etc]" for both licenses

  jmarshall

  committed
  16e332a

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• Updated legal mumbo jumbo

  pd3

  committed
  7cd0fe5

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Commits on Oct 14, 2014

• Print licensing info in --version and usage

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  jmarshall

  committed
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Commits on Oct 8, 2014

• Determine plugin dependencies on the fly; refactored error()

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  pd3

  committed
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Commits on Oct 1, 2014

• new consensus command; rbuf_add replaced with rbuf_prepend/append

  pd3

  committed
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Commits on Sep 12, 2014

• Plugins removed from annotate into a standalone subcommand

  pd3

  committed
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Commits on Sep 3, 2014

• Resolved merge conflict

  pd3

  committed
  2e14e18

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• New "polysomy" command

  pd3

  committed
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Commits on Sep 2, 2014

• New cnv command for copy number variation

  pd3

  committed
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Commits on Aug 19, 2014

• Merge convert, filter, and rename-chrs branches

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  jmarshall

  committed
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Commits on Aug 15, 2014

• man page: Resolved merge conflict

  pd3

  committed
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Commits on Aug 14, 2014

• Canonicalise whitespace -- USE -b/-w TO DIFF/BLAME ACROSS THIS COMMIT

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  jmarshall

  committed
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Commits on Aug 13, 2014

• Reformat license text

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  jmarshall

  committed
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Commits on Aug 11, 2014

• Update copyright years to reflect when changes were made

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  jmarshall

  committed
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