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one362005

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Commits on Mar 7, 2024

• Observable framework notebook

  jameshadfield

  committedMar 7, 2024
  c31e66a

Commits on Mar 5, 2024

• Shift to (now released) nextclade v3

  jameshadfield

  committedMar 5, 2024
  090355a

• Remove ndjson scripts

  jameshadfield

  committedMar 5, 2024
  ec796da

Commits on Mar 4, 2024

• Move to stand-alone ingest workflow

  jameshadfield

  committedMar 4, 2024
  e4aa322

• git subrepo pull (merge) ingest/vendored

  jameshadfield

  committedMar 4, 2024
  70be4cf

Commits on Oct 17, 2023

• git subrepo pull (merge) ingest/vendored

  victorlin

  committedOct 17, 2023
  2b8f995

Commits on Aug 24, 2023

• GitHub action to run & deploy

  jameshadfield

  committedAug 24, 2023
  48bc68d

Commits on Aug 22, 2023

• Update nextclade dataset part 2/2

  jameshadfield

  committedAug 22, 2023
  4d9bbb8

Commits on Aug 21, 2023

• Update nextclade dataset pt 1/2

  jameshadfield

  committedAug 21, 2023
  1240f5c

Commits on Aug 18, 2023

• Use centralized fetch-from-ncbi-entrez

  victorlin

  committedAug 18, 2023
  7f5e143

• git subrepo pull (merge) ingest/vendored

  victorlin

  committedAug 18, 2023
  80fc4c5

Commits on Aug 8, 2023

• Use centralized apply-geolocation-rules

  victorlin

  committedAug 8, 2023
  03e1820

• git subrepo clone (merge) https://github.com/nextstrain/ingest ingest/vendored

  victorlin

  committedAug 8, 2023
  7c9ba86

Commits on Jun 28, 2023

• Add year column

  jameshadfield

  committedJun 28, 2023
  a423fad

• Rename collection_date to date

  jameshadfield

  committedJun 28, 2023
  f2d3d1b

• Fix geographical metadata parsing

  jameshadfield

  committedJun 28, 2023
  332a961

Commits on Jun 27, 2023

• Use Nextclade to align and infer genotype

  jameshadfield

  committedJun 27, 2023
  5428bc9

• Refactor genbank parse script

  jameshadfield

  committedJun 27, 2023
  83e5013

• Fetch records from GenBank via Entrez

  jameshadfield

  committedJun 27, 2023
  0339f27

Commits on Jun 16, 2023

• Working all-HBV build

  jameshadfield

  committedJun 16, 2023
  80bdf40

Commits on Jun 14, 2023

• Initial all-genotype build

  

  jameshadfield

  and

  kistlerk

  committedJun 14, 2023
  5468242

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