chore(main): release 0.4.1 #56
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✅
|
| Descriptor | Linter | Files | Fixed | Errors | Warnings | Elapsed time |
|---|---|---|---|---|---|---|
| ✅ BASH | shellcheck | 1 | 0 | 0 | 0.3s | |
| ✅ BASH | shfmt | 1 | 0 | 0 | 0 | 0.63s |
| jscpd | yes | 198 | no | 5.66s | ||
| jsonlint | 8 | 1 | 0 | 0.21s | ||
| ✅ JSON | prettier | 8 | 0 | 0 | 0 | 0.72s |
| ✅ JSON | v8r | 8 | 0 | 0 | 4.78s | |
| ruff | yes | yes | 1481 | no | 15.73s | |
| cspell | 226 | 1 | 0 | 5.63s | ||
| ✅ YAML | prettier | 4 | 0 | 0 | 0 | 0.81s |
| ✅ YAML | v8r | 4 | 0 | 0 | 3.54s | |
| ✅ YAML | yamllint | 4 | 0 | 0 | 0.33s |
Detailed Issues
⚠️ SPELL / cspell - 1 error
CHANGELOG.md:27:40 - Unknown word (cholespy) -- Upgrade JAX to 0.7 and add cholespy - ([35acd6d](https:
Suggestions: [cholesky, Cholesky, choosey, coles, coley]
CSpell: Files checked: 225, Issues found: 1 in 1 file.
You can skip this misspellings by defining the following .cspell.json file at the root of your repository
Of course, please correct real typos before :)
{
"version": "0.2",
"language": "en",
"ignorePaths": [
"**/node_modules/**",
"**/vscode-extension/**",
"**/.git/**",
"**/.pnpm-lock.json",
".vscode",
"package-lock.json",
"megalinter-reports"
],
"words": [
"cholespy"
]
}
You can also copy-paste megalinter-reports/LINTER_DEFAULT at the root of your repository
⚠️ COPYPASTE / jscpd - 198 errors
Clone found (python):
- src/liblaf/apple/warp/sim/energy/elastic/phace/func.py [98:6 - 104:17] (6 lines, 85 tokens)
src/liblaf/apple/warp/sim/energy/elastic/phace/func.py [71:6 - 76:17]
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src/liblaf/apple/warp/sim/energy/elastic/phace/_main.py [1:1 - 15:6]
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src/liblaf/apple/warp/sim/energy/elastic/phace/_main.py [15:6 - 39:16]
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src/liblaf/apple/warp/sim/energy/elastic/arap_active/func.py [49:6 - 60:6]
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src/liblaf/apple/warp/sim/energy/elastic/arap_active/func.py [63:6 - 74:6]
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src/liblaf/apple/warp/sim/energy/elastic/phace/_main.py [1:1 - 9:2]
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- src/liblaf/apple/warp/sim/energy/elastic/arap/_main.py [23:5 - 40:2] (17 lines, 167 tokens)
src/liblaf/apple/warp/sim/energy/elastic/phace/_main.py [16:5 - 33:2]
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src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [58:11 - 67:7]
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src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [67:7 - 78:7]
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src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [58:11 - 78:7]
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src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [62:2 - 77:12]
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- src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [184:17 - 210:10] (26 lines, 359 tokens)
src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [149:17 - 175:10]
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- src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [220:19 - 229:4] (9 lines, 90 tokens)
src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [58:11 - 67:7]
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src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [92:7 - 78:7]
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- src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [252:25 - 261:4] (9 lines, 90 tokens)
src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [58:11 - 67:7]
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- src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [262:10 - 274:9] (12 lines, 188 tokens)
src/liblaf/apple/warp/sim/energy/elastic/_elastic.py [92:7 - 104:4]
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- src/liblaf/apple/jax/sim/energy/elastic/_phace_active.py [6:1 - 13:5] (7 lines, 78 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_static.py [3:1 - 12:6]
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- src/liblaf/apple/jax/sim/energy/elastic/_phace_active.py [40:9 - 45:2] (5 lines, 129 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_static.py [29:9 - 34:2]
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- src/liblaf/apple/jax/sim/energy/elastic/_arap_active.py [1:1 - 19:11] (18 lines, 145 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_active.py [1:1 - 19:12]
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- src/liblaf/apple/jax/sim/energy/elastic/_arap_active.py [27:13 - 37:3] (10 lines, 100 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_active.py [30:9 - 40:8]
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- src/liblaf/apple/jax/sim/energy/elastic/_arap_active.py [42:5 - 56:7] (14 lines, 200 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_active.py [50:5 - 64:7]
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- src/liblaf/apple/jax/sim/energy/elastic/_arap.py [3:1 - 13:5] (10 lines, 86 tokens)
src/liblaf/apple/jax/sim/energy/elastic/_phace_static.py [3:1 - 13:12]
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- exp/2025/07/30/dynamics/collision/collision-bunny-bunny/main.py [1:1 - 14:5] (13 lines, 115 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [1:1 - 14:4]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [22:5 - 84:8]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [84:4 - 111:2]
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exp/2025/07/30/dynamics/collision/collision-bunny-bunny/main.py [17:5 - 31:4]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [31:1 - 40:3]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [40:3 - 49:6]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [52:9 - 59:7]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [58:2 - 68:4]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [68:2 - 84:10]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [87:5 - 103:13]
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- exp/2025/07/30/dynamics/collision/collision-box/main.py [1:1 - 50:5] (49 lines, 490 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny/main.py [1:1 - 50:3]
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exp/2025/07/30/dynamics/collision/collision-bunny/main.py [54:2 - 81:3]
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exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [49:10 - 96:8]
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exp/2025/07/30/dynamics/collision/collision-bunny/main.py [97:8 - 105:12]
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- tests/warp/sim/energy/elastic/utils/test_hess_diag.py [9:10 - 30:15] (21 lines, 241 tokens)
tests/warp/sim/energy/elastic/utils/test_hess_quad.py [10:6 - 31:11]
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tests/warp/sim/energy/elastic/utils/test_hess_quad.py [97:5 - 103:13]
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tests/warp/sim/energy/elastic/utils/test_hess_quad.py [105:5 - 117:11]
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- src/liblaf/apple/jax/sim/model/_model.py [40:10 - 48:10] (8 lines, 102 tokens)
src/liblaf/apple/jax/sim/model/_model.py [22:4 - 30:4]
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src/liblaf/apple/jax/sim/model/_model.py [22:2 - 30:4]
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src/liblaf/apple/jax/optim/_minimize/_scipy.py [21:5 - 30:8]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [360:16 - 366:16]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [1:1 - 37:10]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [37:31 - 123:8]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [126:11 - 140:8]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [145:5 - 215:6]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [218:11 - 328:8]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [349:11 - 369:4]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [369:2 - 384:4]
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exp/2025/09/24/inverse-grin/src/39-inverse-sparse.py [384
(Truncated to 10000 characters out of 36839)
⚠️ JSON / jsonlint - 1 error
File: .vscode/settings.json
Parse error on line 27, column 5:
....customTags": [ // ref: <https://squ...
----------------------^
Unexpected token "/"
⚠️ PYTHON / ruff - 1481 errors
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/cubic/src/10-gen.py:54:29
|
53 | def callback(intermediate_result: apple.OptimizeResult) -> None:
54 | u: Float[jax.Array, " F"] = intermediate_result["x"]
| ^^^^
55 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
56 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/cubic/src/10-gen.py:55:29
|
53 | def callback(intermediate_result: apple.OptimizeResult) -> None:
54 | u: Float[jax.Array, " F"] = intermediate_result["x"]
55 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
| ^^^^
56 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
57 | result: pv.UnstructuredGrid = physics.objects["box"].geometry
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/cubic/src/10-gen.py:56:29
|
54 | u: Float[jax.Array, " F"] = intermediate_result["x"]
55 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
56 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
| ^^^^^
57 | result: pv.UnstructuredGrid = physics.objects["box"].geometry
58 | result.point_data["solution"] = np.asarray(u)
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/fat-muscle/src/10-gen.py:32:40
|
30 | ):
31 | cell: pv.Cell
32 | barycentric: Float[np.ndarray, "N 3"] = melon.sample_barycentric_coords(
| ^^^^^
33 | (cfg.n_samples, 4)
34 | )
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/fat-muscle/src/10-gen.py:35:36
|
33 | (cfg.n_samples, 4)
34 | )
35 | samples: Float[np.ndarray, "N 3"] = melon.barycentric_to_points(
| ^^^^^
36 | einops.repeat(cell.points, "B D -> N B D", N=cfg.n_samples), barycentric
37 | )
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/10-gen.py:38:33
|
36 | einops.repeat(cell.points, "B D -> N B D", N=cfg.n_samples), barycentric
37 | )
38 | is_in: Bool[np.ndarray, " N"] = melon.triangle.contains(muscle, samples)
| ^^^^
39 | tetmesh.cell_data["muscle-fraction"][cid] = (
40 | np.count_nonzero(is_in) / cfg.n_samples
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/11-inspect-volume.py:24:40
|
23 | tetmesh = tetmesh.compute_cell_sizes()
24 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
| ^^^^
25 | volume: Float[np.ndarray, " C"] = tetmesh.cell_data["Volume"]
26 | occupied_volume: Float[np.ndarray, " C"] = np.sum(volume[muscle_fraction > 1e-9])
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/11-inspect-volume.py:25:31
|
23 | tetmesh = tetmesh.compute_cell_sizes()
24 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
25 | volume: Float[np.ndarray, " C"] = tetmesh.cell_data["Volume"]
| ^^^^
26 | occupied_volume: Float[np.ndarray, " C"] = np.sum(volume[muscle_fraction > 1e-9])
27 | ic(occupied_volume / tetmesh.volume)
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/11-inspect-volume.py:26:40
|
24 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
25 | volume: Float[np.ndarray, " C"] = tetmesh.cell_data["Volume"]
26 | occupied_volume: Float[np.ndarray, " C"] = np.sum(volume[muscle_fraction > 1e-9])
| ^^^^
27 | ic(occupied_volume / tetmesh.volume)
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/20-simulate.py:56:29
|
55 | def callback(intermediate_result: apple.OptimizeResult) -> None:
56 | u: Float[jax.Array, " F"] = intermediate_result["x"]
| ^^^^
57 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
58 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/fat-muscle/src/20-simulate.py:57:29
|
55 | def callback(intermediate_result: apple.OptimizeResult) -> None:
56 | u: Float[jax.Array, " F"] = intermediate_result["x"]
57 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
| ^^^^
58 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
59 | result: pv.UnstructuredGrid = physics.objects["box"].geometry
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/fat-muscle/src/20-simulate.py:58:29
|
56 | u: Float[jax.Array, " F"] = intermediate_result["x"]
57 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
58 | u: Float[jax.Array, "P 3"] = u[physics.objects["box"].dof_id]
| ^^^^^
59 | result: pv.UnstructuredGrid = physics.objects["box"].geometry
60 | result.point_data["solution"] = np.asarray(u)
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:32:34
|
30 | )
31 | physics.add(apple.Object("flesh", apple.jax.energy.tetra.Phace(), geometry))
32 | activation: Float[jax.Array, "C 3 3"] = activations(
| ^^^^^^^
33 | geometry,
34 | np.asarray(
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:55:29
|
54 | def callback(intermediate_result: apple.OptimizeResult) -> None:
55 | u: Float[jax.Array, " F"] = intermediate_result["x"]
| ^^^^
56 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
57 | u: Float[jax.Array, "P 3"] = u[physics.objects["flesh"].dof_id]
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:56:29
|
54 | def callback(intermediate_result: apple.OptimizeResult) -> None:
55 | u: Float[jax.Array, " F"] = intermediate_result["x"]
56 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
| ^^^^
57 | u: Float[jax.Array, "P 3"] = u[physics.objects["flesh"].dof_id]
58 | result: pv.UnstructuredGrid = physics.objects["flesh"].geometry
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:57:29
|
55 | u: Float[jax.Array, " F"] = intermediate_result["x"]
56 | u: Float[jax.Array, " T"] = physics.fill_dirichlet(u, q)
57 | u: Float[jax.Array, "P 3"] = u[physics.objects["flesh"].dof_id]
| ^^^^^
58 | result: pv.UnstructuredGrid = physics.objects["flesh"].geometry
59 | result.point_data["solution"] = np.asarray(u)
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:72:61
|
71 | def activations(
72 | tetmesh: pv.UnstructuredGrid, stretch: Float[ArrayLike, " 3"]
| ^^^^
73 | ) -> Float[jax.Array, "C 3 3"]:
74 | muscle_direction: Float[np.ndarray, "C 3"] = tetmesh.cell_data["muscle-direction"]
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:73:23
|
71 | def activations(
72 | tetmesh: pv.UnstructuredGrid, stretch: Float[ArrayLike, " 3"]
73 | ) -> Float[jax.Array, "C 3 3"]:
| ^^^^^^^
74 | muscle_direction: Float[np.ndarray, "C 3"] = tetmesh.cell_data["muscle-direction"]
75 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
|
F722 Syntax error in forward annotation: Unexpected token at the end of an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:74:41
|
72 | tetmesh: pv.UnstructuredGrid, stretch: Float[ArrayLike, " 3"]
73 | ) -> Float[jax.Array, "C 3 3"]:
74 | muscle_direction: Float[np.ndarray, "C 3"] = tetmesh.cell_data["muscle-direction"]
| ^^^^^
75 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
76 | stretch: Float[jax.Array, " 3"] = jnp.asarray(stretch)
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:75:40
|
73 | ) -> Float[jax.Array, "C 3 3"]:
74 | muscle_direction: Float[np.ndarray, "C 3"] = tetmesh.cell_data["muscle-direction"]
75 | muscle_fraction: Float[np.ndarray, " C"] = tetmesh.cell_data["muscle-fraction"]
| ^^^^
76 | stretch: Float[jax.Array, " 3"] = jnp.asarray(stretch)
77 | orientation: Float[jax.Array, "C 3 3"] = apple.jax.math.orientation_matrix(
|
F722 Syntax error in forward annotation: Expected an expression
--> exp/2025/04/30/human-head/src/10-simulate.py:76:31
|
74 | muscle_direction: Float[np.ndarray, "C 3"] = tetmesh.cell_data["muscle-direction"]
75 | muscle_fractio
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🤖 I have created a release beep boop
0.4.1 (2025-10-26)
✨ Features
🐛 Bug Fixes
📝 Documentation
♻️ Code Refactoring
🛠 Builds
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