update fork #1
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update fork #1
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Owner
julie-sullivan
commented
Oct 2, 2018
julie-sullivan
commented
- I have read the guidelines for bioconda recipes.
- This PR adds a new recipe.
- This PR updates an existing recipe.
- This PR does something else (explain below).
* add thermoparser * fix test
* Only mark the public facing Python files as executable * Kodoja v0.0.7
* Add mccortex * Refactor meta.yaml * Refactor meta.yaml * Add libtool build dependency * Maybe autoconf is the right library * Fix build number * Also need automake * fix sed issue in Mac OS X * Remove unneeded LIBRARY_PATH in build.sh
* Add mccortex * Refactor meta.yaml * Refactor meta.yaml * Add libtool build dependency * Maybe autoconf is the right library * Fix build number * Also need automake * fix sed issue in Mac OS X * Remove unneeded LIBRARY_PATH in build.sh * Fix minor comments from #10860 * bumb build number
* Merge with upstream * Revert "Merge with upstream" This reverts commit 2de34c7. * add lightassembler * fix dependency * fixing zlib * fixing zlib * Added patch
* add bufet * add bufet.bin * add version nr
* update stream to 0.2.1 * update stream to 0.2.1
* Update PureCLIP to v1.1.2 * reset build number and add DOI
* Updated to snpiphy v0.2 * Removed fn in meta.yaml
* Add cortexpy and abeona * Add delegation meta.yaml * Add linter suggested "build: noarch" * Fix incorrect noarch specification * Add some info to the meta.yamls * Update meta.yaml * Update to cortexpy package that includes LICENSE file
Fixing dependency issues with numpy caused by wrong conda-forge compatibility declaration of numpy versions.
#10876) * pin_compatible does not pin API compatible versions of numpy. Pin to the version used for building to avoid problems. * Annoying that is sometimes but not always uses older numpy version.
* add comparems2 * fix compilation * fix mac
* Add package for scanpy.
* snakemake 5.2.3 * Add gitpython dependency. * reset build number * snakemake 5.2.4
* mac recipe and added bioperl * changing bill number * added no osx * adding new version * removed separate recipe for mac, dont need it * now running same recipe for mac and linux
* novasplice 0.0.4 * updated sha256
* Bump starfish to 0.0.19 * Update requirements
* Added recipe for RPF-count-CDS * Simplified requirements, fixed package name * Added noarch flag * Added skip for python3
* Pin two dependencies for abeona * Update build number
* This fails locally, due to building against numpy 1.9 and running against 1.15 * This work, though oddly it's built against 1.15.
* Update sequana version to 0.7.1 * remove sequana from blacklist
* Added reparation_blast * Changed version of blast * Update meta.yaml * Updated version of reparation_blast, adding version output * Update meta.yaml
kat 2.4.1 - add missing cycler dependency
* bumping HULK version * Update meta.yaml * Update meta.yaml
* Bump version * Added SC3 wrapper script package * style
* adding gatk and picard to build * adding tabix
* Added new recipes r-DGEclustering * Update meta.yaml * Update meta.yaml * Update meta.yaml * Update meta.yaml
* add bioconductor-rhdf5 * Update meta.yaml
* Add recipe for rapidnj v2.3.2 * Move test to meta.yaml * Putting test back in separate file * Putting test back into meta.yaml after build change * Revert "Putting test back into meta.yaml after build change" This reverts commit 44ab945. * Delete run_test.sh * fix test? * test the pure help * Update meta.yaml * new try
* update stream to 0.2.2 * update stream to 0.2.3 * update stream to 0.2.4 * update stream to 0.2.4 * update stream to 0.2.4
* Add biom-format 2.1.7 * Bad formatting * addressing @bgruening's comment
* Bump kneaddata * Fix sha256
* update stream to 0.2.2 * update stream to 0.2.3 * update stream to 0.2.4 * update stream to 0.2.4 * update stream to 0.2.4 * update stream to 0.2.5
* Update recipe for paml to include dat/
* updating FI version and increasing STAR version * increasing STAR version
* adding requests lib * adding requests lib version
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