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Pull requests: fulcrumgenomics/fgbio
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Remove uses of VariantContextSetBuilder in all unit tests
#819
opened Mar 28, 2022 by
kstromhaug
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Draft
Remove VariantContexts and other HTSJDK classes from HapCutToVcf and tests
#832
opened Apr 25, 2022 by
kstromhaug
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[feat] Add an option to sort by sequence role in CollectAlternateContigNames
needs review
#868
opened Jul 31, 2022 by
nh13
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Add an option to skip the mate cigar in EstimateRnaSeqInsertSize
needs review
#871
opened Aug 16, 2022 by
nh13
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feat: FastqToBam can extract UMI(s) from the comment in the read name
#989
opened May 20, 2024 by
nh13
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Added some tests to the longestDinuc to cover more edge cases
#1007
opened Aug 21, 2024 by
yfarjoun
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Adding in options to DemuxFastqs for asynchronous reading and writing
#345
opened Dec 23, 2017 by
nh13
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Allow fgbio tools to access meta information about themselves.
#427
opened Aug 20, 2018 by
nh13
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