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Commits on May 4, 2023

• [custom] fix lesson contents

  

  zkamvar

  authored and

  Carpentries Apprentice

  committed
  7a6cd63

• [automation] transform lesson to sandpaper

  

  zkamvar

  authored and

  Carpentries Apprentice

  committed
  8186a5d

• Merge pull request /issues/241 from datacarpentry/update-zenodo-json

  Show description for 13bf99d
  zkamvar

  authored
  13bf99d

• Update .zenodo.json

  Show description for 52e9afd
  zkamvar

  authored
  52e9afd

Commits on May 3, 2023

• Merge pull request /issues/214 from rcastelo/variant-calling-filtering-tstv

  Show description for c6e5047
  ErinBecker

  authored
  c6e5047

• Merge pull request /issues/242 from datacarpentry/zkamvar-patch-1

  Show description for ab773a8
  zkamvar

  authored
  ab773a8

• [markdown] fix ZSH callout

  zkamvar

  authored
  7f92e5a

Commits on Apr 29, 2023

• update zenodo json for lesson release

  tobyhodges

  committed
  d918ddf

Commits on Apr 8, 2022

• Merge pull request /issues/228 from schuyler-smith/patch-1

  Show description for 3a32b4e
  ErinBecker

  authored
  3a32b4e

Commits on Nov 11, 2021

• Update 04-variant_calling.md

  Show description for 570258b
  

  Schuyler Smith

  authored
  570258b

Commits on Oct 23, 2021

• move filtering explanation to callout box

  ErinBecker

  authored
  1b50b8d

Commits on Oct 20, 2021

• Merge pull request /issues/218 from jsarro13/patch-1

  Show description for 515e560
  valgartner

  authored
  515e560

• Merge pull request /issues/223 from ailithewing/feature-branch

  Show description for e364206
  valgartner

  authored
  e364206

• Merge branch 'gh-pages' into feature-branch

  valgartner

  authored
  a504516

• Merge pull request /issues/222 from SRSteinkamp/02-wildcards-in-zsh

  Show description for 415af4a
  valgartner

  authored
  415af4a

• Merge pull request /issues/225 from DininduSenanayake/patch-1

  Show description for 40195a3
  valgartner

  authored
  40195a3

• Merge pull request /issues/227 from klemensnoga/patch-1

  Show description for 3cb83a8
  valgartner

  authored
  3cb83a8

Commits on Oct 16, 2021

• Minor spellcheck in 03-trimming.md

  klemensnoga

  authored
  94a7464

Commits on Aug 5, 2021

• Change the vcf output from bcf to vcf

  Show description for cda6872
  DininduSenanayake

  authored
  cda6872

• change the output directory for vcf to vcf

  Show description for ee82f9b
  DininduSenanayake

  authored
  ee82f9b

Commits on Jun 23, 2021

• change SNP to SNV, remove contractions and make headings sentence case

  ailithewing

  committed
  214ec78

Commits on Jun 14, 2021

• Added a note wildcards in zsh

  SRSteinkamp

  committed
  993feeb

Commits on Feb 9, 2021

• Update 03-trimming.md

  Show description for 01f17c0
  jsarro13

  authored
  01f17c0

Commits on Jul 6, 2020

• Explain filtering variants and show its effects with the TS/TV ratio.

  rcastelo

  committed
  4c3b04f

Commits on Jan 30, 2020

• Merge pull request /issues/210 from tejashree1modak/prereq

  Show description for 80a35c5
  fpsom

  authored
  80a35c5

• Addressing review comments

  TejashreeModak

  committed
  e21e705

Commits on Jan 28, 2020

• Adding a sanity check for fastqc being installed

  TejashreeModak

  committed
  e369f7a

Commits on Jan 25, 2020

• Merge pull request /issues/208 from swbioinf/no-open

  Show description for 3eb00c8
  fpsom

  authored
  3eb00c8

Commits on Jan 6, 2020

• In response to issue 126 - =/=datacarpentry/=/=wrangling-genomics/issues/126

  Show description for e588429
  swbioinf

  committed
  e588429

Commits on Dec 6, 2019

• Merge pull request /issues/199 from biowizz/gh-pages

  Show description for 85faa17
  fpsom

  authored
  85faa17

• Merge pull request /issues/207 from hoytpr/hoyt1

  Show description for 7b35fe2
  fpsom

  authored
  7b35fe2

Commits on Dec 5, 2019

• path typo in fastq text episode 05

  hoytpr

  committed
  7699af6

Commits on Nov 21, 2019

• Merge pull request /issues/206 from datacarpentry/aschuerch-mkdir-move

  Show description for d28789d
  fpsom

  authored
  d28789d

• added expl.

  Show description for e2fc59b
  aschuerch

  authored
  e2fc59b

• removed expl

  aschuerch

  authored
  9a8be9e

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