drop cellchat dependencies #131
stemangiolaAnnotations
13 errors and 22 warnings
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windows-latest (auto)
Package suggested but not available: 'SeuratDisk'
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windows-latest (auto)
R CMD check found ERRORs
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windows-latest (auto)
Process completed with exit code 1.
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macOS-latest (auto)
Package suggested but not available: ‘SeuratDisk’
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macOS-latest (auto)
R CMD check found ERRORs
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macOS-latest (auto)
Process completed with exit code 1.
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ubuntu-latest (auto)
Process completed with exit code 1.
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ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
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ubuntu-latest (auto)
[Workflow Telemetry] Error
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ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
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ubuntu-latest (auto)
[Workflow Telemetry] Error
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ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
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windows-latest (auto)
dependencies 'BiocVersion', 'BiocStyle' are not available
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windows-latest (auto)
replacing previous import 'broom::tidy' by 'tidySingleCellExperiment::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySingleCellExperiment::tidy' by 'tidySummarizedExperiment::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySummarizedExperiment::tidy' by 'tidyseurat::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySingleCellExperiment::join_transcripts' by 'tidyseurat::join_transcripts' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'broom::tidy' by 'tidySingleCellExperiment::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySingleCellExperiment::tidy' by 'tidySummarizedExperiment::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySummarizedExperiment::tidy' by 'tidyseurat::tidy' when loading 'HPCell'
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windows-latest (auto)
replacing previous import 'tidySingleCellExperiment::join_transcripts' by 'tidyseurat::join_transcripts' when loading 'HPCell'
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windows-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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macOS-latest (auto)
harfbuzz 9.0.0 is already installed and up-to-date.
To reinstall 9.0.0, run:
brew reinstall harfbuzz
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macOS-latest (auto)
fribidi 1.0.15 is already installed and up-to-date.
To reinstall 1.0.15, run:
brew reinstall fribidi
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macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
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macOS-latest (auto)
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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macOS-latest (auto)
replacing previous import ‘broom::tidy’ by ‘tidySingleCellExperiment::tidy’ when loading ‘HPCell’
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macOS-latest (auto)
replacing previous import ‘tidySingleCellExperiment::tidy’ by ‘tidySummarizedExperiment::tidy’ when loading ‘HPCell’
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macOS-latest (auto)
replacing previous import ‘tidySummarizedExperiment::tidy’ by ‘tidyseurat::tidy’ when loading ‘HPCell’
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macOS-latest (auto)
replacing previous import ‘tidySingleCellExperiment::join_transcripts’ by ‘tidyseurat::join_transcripts’ when loading ‘HPCell’
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macOS-latest (auto)
replacing previous import ‘broom::tidy’ by ‘tidySingleCellExperiment::tidy’ when loading ‘HPCell’
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macOS-latest (auto)
replacing previous import ‘tidySingleCellExperiment::tidy’ by ‘tidySummarizedExperiment::tidy’ when loading ‘HPCell’
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ubuntu-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-release-r-auto-results", "Windows-biocversion-release-r-auto-results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
Produced during runtime
| Name | Size | |
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Linux-biocversion-devel-r-auto-results
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912 KB |
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Windows-biocversion-release-r-auto-results
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912 KB |
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macOS-biocversion-release-r-auto-results
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903 KB |
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