GPU accelerated scanpy integrated Ingest using NVIDIA RAPIDS

Deep Learning and Machine learning projects related to Healthcare

Performed the CD8 EBV, VZV Lytic vs Latent Antigen analysis. The analysis involved BEAM-T (RNA, ADT, TCR, Antigen), ATACseq, and Flow Cytometry.

Docker Containers

IMMREP25: TCR Specificity Prediction Challenge

Batch and Modality Integration of single cell CITEseq dataset

This repository include TCGA, CCLE, DepMap, and CPTAC

Protein language Transformer for Epitope and TCR binding affinity and avidity

TCR Downstream analysis clonal sharing, diversity, and clonality

Config files for my GitHub profile.

Analyzed role of CD8 T cells in 13 different cancer types.

Develop the RShiny Web Database for scCITESeq in Aging

Based on the scmultiome data, we can build the gene regulatory network using a automated function for FigR.

The automated single cell RNA and single cell ATAC preprocessing pipeline using Seurat and Signac.

Downstream Analysis for bulk ATACseq

I got the MSE of 0.1384 for House Pricing using GradientBoosting model on Kaggle. Ranked on top 34%.