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Performance enhancements, util refactor and and clean up tests #382

Performance enhancements, util refactor and and clean up tests

Performance enhancements, util refactor and and clean up tests #382

Triggered via pull request May 23, 2024 21:03
Status Failure
Total duration 1m 13s
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ci.yml

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You have commit messages with errors ⧗ input: Cleanup imports ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: index_otu() fill out ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Repo._get_source_event_ids() replaces full cache load on init ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Add true iter_otu() cache option ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: OTU.__repr__ accessions field printed as list ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Add a bulk add test ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Add more cached NCBI data ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: New src_test files ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Modifying tests to accomodate new src_test files ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Move unused prototype utils to utils.deprecated ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Move utils.console to legacy.utils ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: utils.id_generator methods moved to legacy.utils ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Reintroduce test_utils_hashing() to legacy tests ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Move Molecule and enums to utils.models Use Strandedness and Topology enums in multiple places ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Molecule is now BaseModel ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.com/conventional-changelog/commitlint/#what-is-commitlint ⧗ input: Updated tests for BaseModel; Moved bad test mark ✖ subject may not be empty [subject-empty] ✖ type may not be empty [type-empty] ✖ found 2 problems, 0 warnings ⓘ Get help: https://github.c