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10 public repositories
matching this topic...
Spatial analysis toolkit for single cell multiplexed tissue data
Updated
Sep 2, 2024
Python
Efficient data structures and IO for whole slide image analysis
Updated
Feb 3, 2026
Python
Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues
Updated
Nov 4, 2025
Python
Brain tissue segmentation using Unet
Updated
Dec 25, 2022
Python
m(6)A methylation analysis
Updated
Mar 9, 2019
Python
This is an open source project to develop an automated embedded focusing system
Updated
Nov 22, 2022
Python
Napari plugin to ease manual correction of epithelial movie segmentation
Updated
Jan 28, 2026
Python
Tissue segmentation and quantification on histopathological images
Updated
May 13, 2019
Python
AtlasPatch: An Efficient and Scalable Tool for Whole Slide Image Preprocessing
Updated
Feb 3, 2026
Python
Semantic segmentation of brain tissue using Mueller matrix polarimetry
Updated
Dec 14, 2025
Python
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