Global Biotic Interactions provides access to existing species interaction datasets
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Updated
Mar 27, 2025 - Java
Global Biotic Interactions provides access to existing species interaction datasets
Scalable joint species distribution modeling
Multi-species size-based ecological modelling in R
Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems
My personal pipeline to species identification on camera trap pix using deep learning, detection/classification with MegaDetector and RetinaNet
Explicit Interaction Community Models
Simulate data and fit 2-species occupancy model à la Rota et al. (2016) w/ Unmarked
Fit multivariate state-space autoregressive models in Jags
Kinetic Monte Carlo simulator for cross-feeding species growth
Species interactions of EU List of Concern Species
paper
A updatet code for the paper Bastazini et al. 2017
Shiny app to help identify pairwise species interactions occurrences in literature
Meet nestor, an R package for the variational inference of species interaction networks from abundance data, while accounting for missing actors.
Plant-Frugivore Interactions for South East Asia mined from published literature
Supplement to the paper Queiroz et al. (2020, Biotropica).
Repository of the article: A synthesis of animal-mediated seed dispersal of palms reveals distinct biogeographic differences in species interactions
This app is for locating endangered organisms' species in the Forests and rural areas and beyond. Park Ranger use and researcher and more for science class course work, delve inot this app built by Mona Hidalgo
Host plant-aphid association data from M.E. Palmer's (1952) "Aphids of the Rocky Mountain Region"
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