Mapping spatiotemporal patterns in an online and continuous fashion

Simulate dynamic environments and LiDAR observations

R package for camera trap data management

Bayesian Ecological Modeling in Python

Local occupancy modeling from Gaussian Mixture Models.

Website of workshop Quantitative Methods for Population Dynamics in R

Illustrate how to fit dynamic occupancy model in TMB. Benchmarking vs. ADMB, Unmarked and JAGS.

R package for fitting Bayesian multiscale occupancy models

Simulate data and fit 2-species occupancy model à la Rota et al. (2016) w/ Unmarked

Inferring poaching with multispecies dynamic occupancy models and hidden Markov models

Data, code and manuscript for 'Spatial occupancy models for data collected on stream networks'

Contains data and R code for paper on occupancy analyses of Brown bear habitat use in the Pyrenees

Code to fit a multistate occupancy model with uncertainty in Jags

Calculate bias in occupancy estimate for static model

This repository contains all the materials needed to reproduce Roth et. al (2017): Functional ecology and imperfect detection of species. Methods in Ecology and Evolution.

A package for fast bayesian analysis of single season spatial occupancy models.

Data and code for a paper on Med monk seal distribution in Greece

Official Code for "Representing Anatomical Trees by Denoising Diffusion of Implicit Neural Fields"

Includes the R code and the supporting materials for our paper "Using machine learning to identify nontraditional spatial dependence in occupancy data"