Skip to content
#

spatyping

Star

Here is 1 public repository matching this topic...

bbeckley-hub / staphscope-typing-tool

Star 4

# Staphscope Typing Tool A unified MLST + spa + SCCmec typing tool for *Staphylococcus aureus*. ## Features - Multi-locus sequence typing (MLST) - spa typing - SCCmec typing using CGE SCCmecFinder - Parallel processing for high-throughput analysis - Comprehensive reporting in multiple formats

pipeline surveillance bioinformatics-pipeline genotyping-by-sequencing antimicrobial-resistance staphylococcus-aureus mrsa sccmec mlst-typing spatyping
  • Updated Oct 2, 2025
  • Perl

Improve this page

Add a description, image, and links to the spatyping topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the spatyping topic, visit your repo's landing page and select "manage topics."

Learn more