nf-core/deepmutscan is a reproducible, scalable, and community-curated pipeline for analyzing deep mutational scanning (DMS) data using shotgun DNA sequencing.

nf-core/deepmutscan: a reproducible, scalable, and community-curated pipeline for analyzing deep mutational scanning (DMS) data using shotgun DNA sequencing

Shotgun metagenomics pipeline for pig gut microbiome: QC, host removal, taxonomic and functional profiling