📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
A dotplot application for DNA/RNA sequence
Genopo a.k.a. F5N - A nanopore sequencing analysis toolkit for Android smartphones https://nanoporetech.com
DNA Sequence Alignment with Dynamic Programming Implementation using the Needleman-Wunsch Algorithm and Smith-Waterman Algorithm.
Summarize SNV and indel information on single gene or genome level together with other relevant statistics based on .vcf files.
Compare biological sequences by the diagonal plot method
Sequence Similarity and Identity Calculator (DNA + Protein)
Implementations of DAA Algorithms in various languages
Simple Java code for sequence alignment and scoring, built on top of biojava-alignment.
Applications that compute pairwise alignments of two biological sequences
Design of Algorithms Projects - Sharif University of Technology - Spring 2021
Implementation of Sequence Alignment using Needleman-Wunsch and Smith-Waterman algorithms with fixed scoring values.
Genopo a.k.a. F5N - a portable DNA analysis toolkit for nanopore data https://nanoporetech.com
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