Annotate sequences by BLAST using NCBI taxonomy information

Automating NCBI BLAST requests from FASTQ/FASTA/GENBANK files to format into a readable file, graph representation and more!

Interactive Visual Output and Functional Predictions visualisations for Job Dispatcher tool outputs

NCBI BLAST+ wrapper for WashU MGI cluster

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Just a simple program for predicting virus hosts.

A phylogenetics web app

Guia de programas e ferramentas de bioinformática e química computacional

Async BLAST+ query service and supporting libraries.

A Python3 script to quickly spot check 10 random sequences from a BAM/FASTx file.

Does multiple nucleotidic | aminoacidic BLAST queries in the NCBI BLAST web from a given multiFASTA and writes the output with the results. The queries are parallelized using Threads.

This is the repository for the Assignments of Practical Bioinformatics Course

Parse binary files from Cblaster into more useful information (tree, table, pie chart)

Small project to use NCBI and RDP websites for Sequence alignments using Selenium for Python

The official Seqs-Extractor Repository

I developed the "National Centre for Biotechnology Information" project to create a comprehensive and user-friendly platform for accessing and exploring a wealth of biotechnological information. Utilizing HTML, CSS, and Bootstrap, I designed a responsive web application that ensures seamless accessibility across various devices and screen sizes.

Blast Query Builder, part of the PhyloclassTalk software for Pharo Smalltalk

This tiny piece of program helps you transferring NCBI Blast result to spreadsheet. You just need to download the Blast result in a single JSON file.

An R package to prepare data for phylogenetic analysis

Python and R Scripts for Statistical analysis of available immunogobulin variable genes