Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
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Apr 30, 2024 - R
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blast-search
Here are 16 public repositories matching this topic...
Seamless Integration of BLAST Sequence Searches in R
protein species blast blast-searches nucleotide biological-sequences blasting blastn blast-search sequence-diversity biomartr blast-hits
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Sep 10, 2023 - R
MView extracts and reformats the results of a sequence database search or multiple alignment.
bioinformatics fasta blast blast-search bioinformatics-tool clustal sequence-alignment-visualization
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Sep 8, 2024 - Perl
genomic alignment similarity search tool
fasta sequence-alignments align-dna-sequences dna-sequences sequence-alignment fasta-sequences blastn genomic-data-analysis blast-search spaced-seed
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May 29, 2024 - C
Microsoft Azure HPC & Big Compute
bioinformatics research blast azure-storage blast-searches lifescience blastn blast-search azure-hpc
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Aug 18, 2019 - JavaScript
A PHP wrapper for NCBI BLAST URL API
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Sep 4, 2019 - PHP
Repo for course 4 bioinformatics
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Jun 27, 2022 - Python
Sequence similarity searches (e.g. BLAST) made easy
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Sep 6, 2023 - Python
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
alignment rna-structure burrows-wheeler-transform blast-search aho-corasick-algorithm suffix-array pushdown-automata q-grams horspools-algorithm
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May 17, 2024 - C++
The official Seqs-Extractor Repository
ssr linux-mint fasta ncbi-blast blast-search extract-sequences blast-database misa misa-search seqs-extractor blastx microssatelites
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Dec 15, 2023 - Shell
An improved method for predicting binders of HLA-DRB1-04:01
machine-learning-algorithms blast-search immunoinformatics immunotherapeutics computer-aided-vaccine
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Oct 20, 2024 - Python
Tool for analysing BLAST output for ncRNA sequences
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May 19, 2022 - Python
Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
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Sep 16, 2018 - Java
Supporting material for MMG 801 Lectures 3–5 on 'Phylogeny and Comparative Genomics'
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May 25, 2022
Retrieves matrix with number of gene/protein hits per query in the blast result. Takes blast tabular file as input.
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Feb 29, 2024 - Python
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