[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

PyTorch 3D U-Net implementation for Multimodal Brain Tumor Segmentation (BraTS 2021)

A pytorch implementation of 3D UNet for 3D MRI Segmentation.

Brain Segmentation on MRBrains18

Neural network-based MRI preprocessing: Prep 🧠 images in seconds 🔥

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.

PNH segmentation pipelines based on nipype

Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

[AAAI'20] Segmenting Medical MRI via Recurrent Decoding Cell (Spotlight)

Automatic segment and generate masks for any 3D medical images using SAM model without prompt

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.

TensorFlow implementation of our paper: "Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging [Medical Physics 2021]".

[Brainlesion 2022] Official PyTorch Code for Hybrid Window Attention Based Transformer Architecture for Brain Tumor Segmentation: Solution for FeTS 2022 Task 2

Pytorch implementation of the DWP with application to MRI segmentation

This is the official repository for Fast-nnUNet, a new fast model inference framework based on the nnUNet framework implementation, developed by the AI Lab of Xiaozhi Future (Chengdu) Tech Inc.

Magnetic Resonance Images segmentation by Deep Neural Networks (Master Thesis)

Official Implementation of ARACHNET: INTERPRETABLE SUB-ARACHNOID SPACE SEGMENTATION USING AN ADDITIVE CONVOLUTIONAL NEURAL NETWORK

We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.

This is my Master thesis work at TU Delft, to longitudinally segment the MRI brain image series by 4D network.

In this project I'm going to segment Tumor in MRI brain Images with a UNET which is based on Keras. The dataset is available online on Kaggle, and the algorithm provided 99% accuracy with a validation loss of 0.11 in just 10 epochs.