Genome-centric Multi-omic Analysis Workflow for the Marinimicrobia paper
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Updated
Jan 17, 2022 - Shell
Genome-centric Multi-omic Analysis Workflow for the Marinimicrobia paper
This GitHub describes the reproducible metatranscriptomics workflow used by Speciale et al. (in prep, 2026) for California Current System iron incubation experiment samples from 2023.
Multi-omics workflows for metagenomic and metatranscriptomic analyses of subtropical peat (Everglades Agricultural Area, USA) soils investigating lignin degradation, soil organic carbon cycling, and microbial functional ecology using dbCAN3, KofamScan, CAMPer, and HiPerGator.
Probe capture enrichment sequencing of amoA genes
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