Registry of containerized biosimulation tools that support a standard command-line interface

Basic Mathematic Model | Study Notes & Demos

A P2P contribution protocol with token issuance, prestige evaluation, and decentralized governance.

AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

This portfolio brings together all the major projects I carried out during my training at the National Advanced School Of Engineering of Yaoundé.

Code associated with the Karr Lab's 2018 whole-cell modeling review in Current Opinion in Biotechnology

Data, code and interactive figures for the preprint "Quantitative analysis of tumour spheroid structure”.

A Mathematical Model for Orbit Debris Proliferation. This project also includes Jacobian analysis for finding equilibrium solutions and stability point.

"Cluster Assembly Dynamics Drive Fidelity of Planar Cell Polarity Polarization" published in Nature Communications (2026)

Shows the weekday given a date.

"Circling in on Convective Self-Aggregation" published in Journal of Geophysical Research: Atmospheres (2021)

MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container

GEO (Hidden Geometry Framework): exploratory geometric operators, reproducible cosmological tests, GEO-Lens applications, and structural validation studies.

R programs for Numerical Methods (Trapezoidal, Simpson’s, etc.)

CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

BoolNet biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

Unified mathematical model of metabolic collapse integrating APOE, TREM2, PSEN1, and OTULIN dynamics based on East Asian genomic statistical structure.

A multidimensional mathematical model of value creation starting from the bipolar void (0,0), using tensor products.

This repository contains the public release of the Phase-Gradient Cavitation Model. The model is constructed using conventional mathematical tools (fluid analogy, divergence, gradient behavior, and phase-differential structures), and organized using conceptual clarity inspired by the Contextual Premise Framework (CPF).