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Apr 20, 2017 - Jupyter Notebook
immunoinformatics
Here are 59 public repositories matching this topic...
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Apr 25, 2017 - Jupyter Notebook
Wrapper for the ImmPort API
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Dec 21, 2017 - HTML
PepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data
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Feb 21, 2018 - R
Open Source python module to enable batch gold particle picking, filtering, processing & statistical modelling of TEM images produced by IGEM (immunogold electron microscopy).
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Jul 31, 2018 - Jupyter Notebook
(Under development) Computational framework for probabilistic models of immune receptor assembling.
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Aug 6, 2018 - C++
Browser of clonal trees showing evolutionary development of antibodies with ultra-long CDR3s in 50 cattle individuals
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Aug 29, 2018
Differential presentation analysis of T cell epitopes associated with autoimmunity
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Mar 17, 2019 - R
Incredible Deep Learning in immunooncology with Pytorch - workshop at AIRR Community Meeting IV
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May 13, 2019 - Jupyter Notebook
Slides for presentations by ImmunoMind team
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May 15, 2019
Vaccine/Diagnostics Development Pipelines
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Dec 15, 2019 - Shell
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Dec 27, 2019 - Python
Suit of statistical procedures for robust quantification of various BCR and TCR repertoire properties
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Jan 26, 2020 - R
Electron app for performing HLA antibody analysis of reactivity panels
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Apr 23, 2020 - HTML
🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
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May 21, 2020
[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
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Jun 8, 2020 - R
An elegant virtual crossmatch tool based on machine learning
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Jul 1, 2020 - HTML
Immune cell phenotyping of lung cancer and lung tissue using PCA, tSNE, and other techniques
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Feb 26, 2021 - R
WES HLA Typing based on multiple alternative tools
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Mar 8, 2021 - Python
TCR-pMHC binding affinity prediction challenge; Copenhagen Bioinformatics Hackathon 2021
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Apr 25, 2021 - Jupyter Notebook
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