#

global-alignment

Here are 15 public repositories matching this topic...

MeganQiu / pairwise-alignment-in-BIOINF

dynamic-programming global-alignment semi-global-alignments local-alignment

Updated Nov 30, 2017
Python

xuedong / time-series

Clustering of time series.

dtw dba global-alignment

Updated Mar 15, 2018
Python

giamuhammad / needleman-wunsch_global_alignment

Global Alignment for DNA/RNA/Protein Sequence. Needleman-Wunsch Algorithm. An Implementation in Web with Python and Flask Back-end

bioinformatics alignment global-alignment dna-sequences sequence-alignment needleman-wunsch-algorithm

Updated Jun 17, 2018
Python

kanzabatool / Independent-Study

Weekly reports for the Summer Independent Course ECE-592 shall be uploaded here.

protein-sequences dynamic-programming global-alignment

Updated Aug 6, 2018
Python

chuankaizhao / sequenceAlignment-Bioinformatics

scoring dynamic-programming global-alignment

Updated Sep 23, 2018
Python

PetePrattis / sequence-global-alignment-with-unknown-nucleotides

A Python script that for a parameter k, calculates the universal alignment of 2 sequences, with limitation that the alignment contains at most k unknown nucleotides. Nucleotide sequences are sometimes written in a 5-character alphabet, A, T, G, C, and N where N stands for an undefined nucleotide.

python computer-science bioinformatics student fasta program global-alignment sequence-alignment nucleotides chromosomes

Updated Nov 25, 2019
Python

bott0n / Needleman-Wunsch-Algorithm

Needleman-Wunsch Algorithm for global alignment and local alignment

algorithm dna protein biopython global-alignment sequences local-alignment neeldman-wunsch

Updated Feb 12, 2020
Python

crazypegasusvv / Needleman-Wunsh_algorithm

Project in Python language for Bioinformatics course starting october '20, aimed at implementing Needleman-Wunsh algorithm.

python3 global-alignment string-similarity needleman-wunsch-algorithm

Updated Jun 19, 2020
Python

Jomat18 / Computacion-Molecular-Biologica

Algoritmos para el alineamiento de secuencias de ADN

global-alignment sequence-alignment local-alignment dot-plot

Updated Aug 26, 2020
Python

Enescigdem / SequenceAlignment

Global and Local Sequence Alignment

bioinformatics smith-waterman needleman-wunsch global-alignment needleman-wunsch-algorithm local-alignment smith-waterman-alignment

Updated Nov 30, 2020
Python

alimz758 / Sequence-Alignment---Bio-informatics

Global and local DNA sequence alignment

global-alignment sequence-alignment needleman-wunsch-algorithm local-alignments hirschberg

Updated Dec 13, 2020
Python

mohmmedfathi / Alignment-Api

Local and Global Alignment API

django bioinformatics django-rest-framework drf alignment global-alignment django-project local-alignment bioinformatics-services

Updated Jan 3, 2023
Python

CharliesCodes / bioinformatics

A compilation of all the programs in my bioinformatics course

bioinformatics pattern-matching udemy global-alignment sequence-alignment de-novo-assembly needleman-wunsch-algorithm semiglobal local-alignment udemy-course smith-waterman-algorithm semiglobalmatching free-shift-alignment mapping-assembly

Updated Jan 12, 2023
Python

vinnik-dmitry07 / protein-prediction

My assignments from Munich

scs global-alignment lcs orf local-alignment pssm-matrix

Updated Aug 10, 2023
Python

aziele / pairwise-sequence-alignment

A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water

smith-waterman needleman-wunsch needle water global-alignment sequence-alignment emboss protein-sequence pairwise-alignment local-alignment nucleotide-sequence

Updated Oct 30, 2024
Python

Improve this page

Add a description, image, and links to the global-alignment topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the global-alignment topic, visit your repo's landing page and select "manage topics."