🧬 gget enables efficient querying of genomic reference databases

genes and genomes at your fingertips

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

A client for the Ensembl REST API written in the Python programming language

Extract the Ensembl genes catalog to simple tables

Utilities for downloading and managing protein FASTA files.

Python tools for proteogenomics analysis toolkit

Provided tool will add explicit 3'UTR and extends it into a valid Ensembl GTF file. It's useful for 3'RNAseq when 3' coordinates might not be as good as you expect.

A small library to work with ensembl and other annotations in python

Gexplora - user-interface to analyse genomic elements along chromosomes

Ensembl's data lakehouse backend | GSoC '22

Python script to migrate genomic data from MySQL DB to parquet files (with added support to upload output files to AWS S3) | GSoC '22

Public REST API (Endpoint for testing purposes) for Ensembl Gene Autocompetion Table

Python wrapper of the Ensembl REST API

Super fast conversion of GVF file format to VCF file format

Management of References for Yourself

A Django project which implements a REST API endpoint 'genes' for returning results matching supplied query patterns

EnsemblX is a Python applet with a simple GUI to speed up and simplify the process of referencing barley gene annotations from Ensembl Plants and BARLEX. Automates importing and processing of data from spreadsheets.