Plant Disease Identification Using Convulutional Neural Network

Analyze your RNA sequencing data without writing a single line of code

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

Natural Language Search and Analysis of High Dimensional Genomic Data

A suite of tools to explore protein structures with Protein Blocks 🐍

A python project for analysis of codon usage for gene or genome analysis

Explore biomolecular pathways in Reactome from the command-line or a Python script

programs and scripts, mainly python, for analyses related to nucleic or protein sequences

Python code to extract features from Protein sequences for Machine Learning/Deep Learning

🐍 Snakemake wrappers for bioinformatics.

pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets

Python Library for data analysis based on GMQL

A Python package to quickly decompose weighted graphs (acyclic or not) into weighted paths or walks, under various models.

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.

Searching for Horizontal Gene Transfer

Quality control plotting for long reads

CoNSEnsX - Complience of NMR-derived Structural Ensembles with Experimental Data

Download and annotate TCGA RNA-seq counts from the GDC portal