Create admixture model files (*.F, *.alleles) based on WBBC project of Westlake University.

A Snakemake powered pipeline developed to perform population structure and admixture analysis given multiple Variant Call Format datasets. This has been developed in partial fulfilment of a MSc in Bioinformatics at the University of Pretoria by Graeme Ford.

Ancestry Calculator for WeGene, It features population admixture model and MLE (Maximum Likelihood Estimation) algorithm to estimate admixture.

R package and web app for spatial visualisation of admixture on a projected map

Imputation and Admixture for lcWGS in one goal

Rapid population clustering with autoencoders

A program to model admixture using marker genotype data

An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

Set of scripts used for the paper "A Neurodegenerative Disease Landscape of Rare Mutations in Colombia Due to Founder Effects"

Set of scripts used for the paper "A Neurodegenerative Disease Landscape of Rare Mutations in Colombia Due to Founder Effects"

tips and tricks in genome-wide association studies - a tutorial

Diablo G25 - is a tool for conversion of VCF file to 23AndMe format and calculation of admixture scores from it.

Tool to estimate purity of tumor samples exploiting DNA Methylation data

Julia wrapper of the ADMIXTURE program for estimating ancestry

"xadmix" is an R package providing functions to facilitate subsetting and plotting of genetic admixture data.

haplotype-based admixture inference and dating software

Miscellaneous scripts that do not really deserve their own repos

faster haplotype-based admixture inference and dating software

Utilities for analyzing next generation sequencing data.

Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis