Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[python] Update TileDB-SOMA to use the somacore release with spatial datatypes #3078

Merged
merged 11 commits into from
Sep 27, 2024

Apply suggestions from code review

a8b079c
Select commit
Loading
Failed to load commit list.
Merged

[python] Update TileDB-SOMA to use the somacore release with spatial datatypes #3078

Apply suggestions from code review
a8b079c
Select commit
Loading
Failed to load commit list.
Codecov / codecov/patch succeeded Sep 27, 2024 in 0s

71.73% of diff hit (target 0.00%)

View this Pull Request on Codecov

71.73% of diff hit (target 0.00%)

Annotations

Check warning on line 94 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L93-L94

Added lines #L93 - L94 were not covered by tests

Check warning on line 130 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L130

Added line #L130 was not covered by tests

Check warning on line 178 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L178

Added line #L178 was not covered by tests

Check warning on line 201 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L201

Added line #L201 was not covered by tests

Check warning on line 212 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L212

Added line #L212 was not covered by tests

Check warning on line 221 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L221

Added line #L221 was not covered by tests

Check warning on line 230 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L230

Added line #L230 was not covered by tests

Check warning on line 239 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L239

Added line #L239 was not covered by tests

Check warning on line 248 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L248

Added line #L248 was not covered by tests

Check warning on line 260 in apis/python/src/tiledbsoma/_geometry_dataframe.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_geometry_dataframe.py#L260

Added line #L260 was not covered by tests

Check warning on line 38 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L38

Added line #L38 was not covered by tests

Check warning on line 47 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L47

Added line #L47 was not covered by tests

Check warning on line 97 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L96-L97

Added lines #L96 - L97 were not covered by tests

Check warning on line 116 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L116

Added line #L116 was not covered by tests

Check warning on line 161 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L161

Added line #L161 was not covered by tests

Check warning on line 172 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L172

Added line #L172 was not covered by tests

Check warning on line 181 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L181

Added line #L181 was not covered by tests

Check warning on line 190 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L190

Added line #L190 was not covered by tests

Check warning on line 199 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L199

Added line #L199 was not covered by tests

Check warning on line 208 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L208

Added line #L208 was not covered by tests

Check warning on line 217 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L217

Added line #L217 was not covered by tests

Check warning on line 226 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L226

Added line #L226 was not covered by tests

Check warning on line 234 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L234

Added line #L234 was not covered by tests

Check warning on line 246 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L246

Added line #L246 was not covered by tests

Check warning on line 255 in apis/python/src/tiledbsoma/_multiscale_image.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

apis/python/src/tiledbsoma/_multiscale_image.py#L255

Added line #L255 was not covered by tests