[question] Can query_pan_genome be set for percentage

[dutchscientist]

is it possible to use query_pan_genome with a percentage, just as roary? For example, when comparing two groups, be able to set thresholds like "max 30% present in group 1, min 70% present in group 2" or vice versa. Maybe it's already there and I am missing it.

Thanks :)

[andrewjpage]

Hi,
That functionality isnt there at present, but it sounds like it would be
useful.
Andrew

On 23 July 2015 at 02:31, dutchscientist notifications@github.com wrote:

is it possible to use query_pan_genome with a percentage, just as roary?
For example, when comparing two groups, be able to set thresholds like "max
30% present in group 1, min 70% present in group 2" or vice versa. Maybe
it's already there and I am missing it.

Thanks :)

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