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Commits on Mar 14, 2022

• Reverted Java version

  kpepper

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Commits on Mar 10, 2022

• Upgraded log4j and picard. Removed redundant evosuite tests.

  kpepper

  committed
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Commits on Nov 21, 2018

• Build process updates, mostly for Mac

  kpepper

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Commits on Oct 16, 2018

• Fixed Eclipse classpath - removed non-maven repo jars

  kpepper

  committed
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Commits on Oct 3, 2018

• Project restructuring changes

  kpepper

  committed
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Commits on Jun 7, 2018

• Adding a few evosuite tests

  kpepper

  committed
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Commits on Mar 21, 2018

• First commit of Maven build changes

  kpepper

  committed
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Commits on Jan 25, 2018

• Changed EBI DbFetch code so that the function works again. Added latest picard jar. More work on CRAM file loading. Updated/added scripts for application start. Small tweaks to makefile/ant. Remove…

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  kpepper

  committed
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Commits on Jan 8, 2018

• Fixed deprecated feature warnings for Java 1.8

  kpepper

  committed
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• Addition of CRAM file handling. Update of various jars. Addition of more unit tests.

  kpepper

  committed
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Commits on Oct 9, 2017

• Changes to new unit tests

  kpepper

  committed
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Commits on Oct 2, 2017

• First commit of unit test changes. Added more manual unit tests, an EvoSuite regression set and coverage reporting. Moved Java version for Artemis to Java 8. Ripped out redundant Corba code.

  kpepper

  committed
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Commits on Jan 29, 2014

• rework GFF3 export code

  satta

  committed
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Commits on Sep 13, 2013

• update

  

  tcarver

  committed
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Commits on Nov 20, 2012

• change to batik 1.7

  

  tcarver

  committed
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Commits on Nov 15, 2012

• add svg libs

  

  tcarver

  committed
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Commits on May 13, 2011

• add commons-net

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  tjc

  committed
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Commits on Feb 23, 2011

• update

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  tjc

  committed
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Commits on Jan 4, 2010

• remove picard version number from jar name

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  tjc

  committed
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Commits on Sep 15, 2009

• update picard

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  tjc

  committed
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Commits on Sep 14, 2009

• add picard / sam library

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  tjc

  committed
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Commits on Aug 13, 2009

• update postgres driver

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  tjc

  committed
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Commits on Oct 28, 2008

• remove macos.jar and update ibatis libs

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  tjc

  committed
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Commits on May 8, 2008

• jobcontrol.jar is no longer used

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  rh11

  committed
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Commits on Mar 1, 2007

• new log4j

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  tjc

  committed
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Commits on Nov 29, 2006

• add log4j to classpath

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  tjc

  committed
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Commits on Nov 23, 2006

• updates

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  tjc

  committed
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Commits on Oct 27, 2006

• ejb persistence still needed

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  tjc

  committed
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• remove ejb persistence jar from classpath

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  tjc

  committed
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Commits on Oct 23, 2006

• add chado jar

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  tjc

  committed
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Commits on Sep 25, 2006

• new postgres driver

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  tjc

  committed
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Commits on Nov 21, 2005

• update

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  tjc

  committed
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Commits on Nov 13, 2005

• exclude ExternalProgramUtil.java from classpath

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  tjc

  committed
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Commits on Nov 11, 2005

• eclipse classpath

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  tjc

  committed
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