saketkc
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pysradb Public
Package for fetching metadata and downloading data from SRA/ENA/GEO
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pySCTransform Public
Python package to perform normalization and variance-stabilization of single-cell data
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sctransform Public
Forked from satijalab/sctransformR package for modeling single cell UMI expression data using regularized negative binomial regression
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2023_Albicans_Flucanazole Public
Jupyter Notebook BSD 2-Clause "Simplified" License UpdatedAug 18, 2024 -
pyro-rethinking Public
Statistical Rethinking with Pyro
Jupyter Notebook BSD 2-Clause "Simplified" License UpdatedJul 25, 2024 -
fos-proposals Public
💝 🐧 Archive of GSoC proposals
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weatherunion Public
R package to fetch temperature, wind soeed, precipitation and related information from Zomato's weatherunion.com API.
R Other UpdatedMay 8, 2024 -
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iitb-library-sms-interface Public archive
Sends automated SMSes reminding you of due dates from IITB moodle/asc
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covmuller Public
Covmuller is an R-package designed for analysis of SARS-CoV-2 sequencing metadata deposited on GISAID
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pyseqlogo Public
Python package to plot sequence logos
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pyvirchow Public
Tools for whole slide image processing and classification
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misc_bed_availability_scraper Public
Forked from grill05/misc_bed_availability_scraperPython UpdatedApr 3, 2023 -
covid19bharat_data Public
Forked from DataKind-BLR/covid19bharat_dataIndia's district level covid19 data. This is the continued effort carry forwarded by what covid19india.org's team had initiated
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genomeofindia Public
Scripts for GenomeOfIndia substack
Jupyter Notebook MIT License UpdatedJan 20, 2023 -
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bisc-104 Public
Teaching material used for BISC-104L[Fall 2016] at USC Edit
TeX BSD 2-Clause "Simplified" License UpdatedDec 11, 2022 -
Scripts to generate corrected barcodes list for a list of custom barcodes for ParseBiosciences kit
Jupyter Notebook MIT License UpdatedOct 29, 2022 -
moca Public
Ⓜ️ Tool for motif conservation analysis -
scRNA_NB_comparison Public
Scripts to reproduce the analyses in the paper "Comparison and evaluation of statistical error models for scRNA-seq"
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signac Public
Forked from stuart-lab/signacR toolkit for the analysis of single-cell chromatin data
R Other UpdatedApr 25, 2022 -
scVI Public
Forked from scverse/scvi-toolsDeep generative modeling for single-cell omics data
Python MIT License UpdatedMar 17, 2022 -
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cobolt Public
Forked from epurdom/coboltA Python package for jointly analyzing multimodal single-cell sequencing data
Python GNU General Public License v3.0 UpdatedJan 14, 2022