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Artifact qiita_db fixes #1535

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Merged
merged 11 commits into from
Nov 18, 2015
Merged

Artifact qiita_db fixes #1535

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00d60d7
Fixing search object
josenavas Nov 12, 2015
a756bd5
Merge branch 'artifact' of https://github.com/biocore/qiita into arti…
josenavas Nov 18, 2015
c49f243
Adding iter public to artifact
josenavas Nov 18, 2015
12327d3
Fixing meta-util package
josenavas Nov 18, 2015
e23786f
Adding load_artifact_cmd and test
josenavas Nov 18, 2015
8687a7e
Fixing commands module
josenavas Nov 18, 2015
ef6461a
Fixing qiita-env script
josenavas Nov 18, 2015
64bedce
Fixing qiita script
josenavas Nov 18, 2015
11703ac
Merge branch 'artifact-fixing-more-stuff' into artifact-fix-search
josenavas Nov 18, 2015
ac16aef
Do not access to the DB until we are sure that it exists
josenavas Nov 18, 2015
124685c
Merge branch 'artifact' of https://github.com/biocore/qiita into arti…
josenavas Nov 18, 2015
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19 changes: 19 additions & 0 deletions qiita_db/artifact.py
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Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,25 @@ class Artifact(qdb.base.QiitaObject):
"""
_table = "artifact"

@classmethod
def iter_public(cls):
r"""Iterator over the public artifacts available in the system

Returns
-------
generator of qiita_db.artifact.Artifact
The public artifacts available in the system
"""
with qdb.sql_connection.TRN:
sql = """SELECT artifact_id
FROM qiita.artifact
JOIN qiita.visibility USING (visibility_id)
WHERE visibility = 'public'
ORDER BY artifact_id"""
qdb.sql_connection.TRN.add(sql)
for a_id in qdb.sql_connection.TRN.execute_fetchflatten():
yield cls(a_id)

@classmethod
def create(cls, filepaths, artifact_type, prep_template=None,
parents=None, processing_parameters=None,
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