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Merged
merged 1 commit into from
Oct 29, 2024
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@jan-janssen jan-janssen commented Oct 29, 2024

Summary by CodeRabbit

  • Bug Fixes

    • Improved handling of the working directory by ensuring it is converted to an absolute path before submission, enhancing robustness against path-related issues.
  • Tests

    • Updated test cases to reflect changes in the working directory definition, ensuring accurate testing of the executor's functionality.

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coderabbitai bot commented Oct 29, 2024

Walkthrough

The changes made in this pull request involve modifications to the execute_with_pysqa function in the executorlib/standalone/cache/queue.py file, specifically regarding the handling of the working_directory parameter. The working directory is now processed as an absolute path using os.path.abspath. Additionally, the TestCacheExecutorPysqa class in the tests/test_cache_executor_pysqa_flux.py file has been updated to change the cwd value for testing purposes. The overall functionality and structure of the code remain unchanged.

Changes

File Path Change Summary
executorlib/standalone/cache/queue.py Modified execute_with_pysqa to use os.path.abspath(resource_dict["cwd"]) for the working_directory.
tests/test_cache_executor_pysqa_flux.py Updated cwd in resource_dict for Executor instantiation from os.path.abspath("cwd") to "exe_working_directory".

Possibly related PRs

  • Cache: Add working directory parameter #446: The changes in this PR introduce a cwd parameter to the FileExecutor class, which is directly related to the handling of the working_directory parameter in the execute_with_pysqa function of the main PR.
  • Cache: create method #459: This PR modifies the FileExecutor class, which is relevant as it may interact with the changes made to the working directory handling in the main PR, although it does not directly address the cwd parameter.

🐇 In the code we make a change,
To paths that might seem strange.
From relative to absolute we go,
To keep our paths all aglow!
With tests that check both night and day,
Our rabbit code will hop and play! 🐇


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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (1)
executorlib/standalone/cache/queue.py (1)

Line range hint 1-47: LGTM! Good improvement for queue system compatibility.

Converting the working directory to an absolute path is a good practice for queue systems, as it prevents potential issues with path resolution when jobs are executed on different nodes or with different working directories.

Consider documenting this behavior in the docstring's resource_dict description to make it clear that the working directory will be converted to an absolute path.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between ac98c42 and 6ef9dc2.

📒 Files selected for processing (2)
  • executorlib/standalone/cache/queue.py (2 hunks)
  • tests/test_cache_executor_pysqa_flux.py (1 hunks)
🔇 Additional comments (2)
tests/test_cache_executor_pysqa_flux.py (1)

37-37: Verify the removal of absolute path handling from test.

While this change might be intentional given that execute_with_pysqa now handles absolute path conversion internally, it would be helpful to document why we're moving away from using os.path.abspath in the test. This would make the test's assumptions more explicit.

Let's verify the absolute path handling in the main implementation:

✅ Verification successful

Let's gather more information about the path handling in the implementation:


The results show that execute_with_pysqa in queue.py actually handles the absolute path conversion internally:

"working_directory": os.path.abspath(resource_dict["cwd"]),

This confirms that the absolute path conversion is now handled by the implementation rather than the test. Let me generate the final response:

Test change aligns with implementation's path handling

The removal of os.path.abspath from the test is correct since execute_with_pysqa now handles the absolute path conversion internally. The implementation explicitly converts the cwd value to an absolute path using os.path.abspath(resource_dict["cwd"]) before passing it as working_directory to the queue adapter.

🏁 Scripts executed

The following scripts were executed for the analysis:

Script:

#!/bin/bash
# Description: Verify that execute_with_pysqa now handles absolute path conversion

# Test: Search for absolute path handling in the queue implementation
rg -A 5 "execute_with_pysqa" executorlib/standalone/cache/queue.py

Length of output: 252


Script:

#!/bin/bash
# Search for path handling in execute_with_pysqa implementation
rg -A 15 "execute_with_pysqa" executorlib/standalone/cache/queue.py

# Search for cwd handling in the same file
rg -B 2 -A 5 "cwd" executorlib/standalone/cache/queue.py

# Check if there are any path conversions in the flux implementation
rg -B 2 -A 5 "path\.abs" executorlib/standalone/cache/flux.py

Length of output: 1866

executorlib/standalone/cache/queue.py (1)

36-36: 🛠️ Refactor suggestion

Consider handling edge cases in path conversion.

While using os.path.abspath is a good improvement, there are some edge cases to consider:

  1. resource_dict["cwd"] could be None
  2. The path might contain environment variables or user home (~) that should be expanded

Let's verify the current usage patterns:

Consider enhancing the path handling:

-        "working_directory": os.path.abspath(resource_dict["cwd"]),
+        "working_directory": os.path.abspath(os.path.expanduser(os.path.expandvars(resource_dict["cwd"] or "."))),

@jan-janssen jan-janssen merged commit cc96c43 into main Oct 29, 2024
24 checks passed
@jan-janssen jan-janssen deleted the queue_abs_path branch October 29, 2024 10:20
@coderabbitai coderabbitai bot mentioned this pull request Oct 29, 2024
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