v0.0.5

What's Changed

• Bump dependencies by @robomics in #94
• Fix performance regression in hictk::balance by @robomics in #95
• Prepare for release by @robomics in #96

Full Changelog: v0.0.4...v0.0.5

v0.0.4

What's Changed

• [bugfix] hictk convert (cool2hic) by @robomics in #74
• Bump actions/github-script from 6 to 7 by @dependabot in #75
• Fix typo in weight name to weight type mappings by @robomics in #76
• Refactor internal::PixelMerger by @robomics in #78
• Bump dependencies by @robomics in #80
• Bump actions/setup-python from 4 to 5 by @dependabot in #82
• Update compilers used by CI by @robomics in #83
• Fix Dockerfile ARM builds by @robomics in #84
• Add --cis-only and --trans-only CLI options to hictk dump by @robomics in #79
• Fix CI by @robomics in #86
• Bump actions/upload-artifact from 3 to 4 by @dependabot in #88
• Bump actions/download-artifact from 3 to 4 by @dependabot in #89
• Support variable bin sizes by @robomics in #81
• Initial implementation of utilities to rename chromosomes in cooler files by @robomics in #77
• Address clang tidy warnings by @robomics in #87
• Fix GCC 10 builds by @robomics in #90
• Update CLI reference docs by @robomics in #92
• Improve ICE balancing by @robomics in #93
• Prepare for release by @robomics in #91

Full Changelog: v0.0.3...v0.0.4

v0.0.3

What's Changed

• Update conanfile.txt by @robomics in #53
• Support reading hic v6 and v7 by @robomics in #52
• Improve performance of hictk validate when processing .mcool files by @robomics in #56
• Update CI by @robomics in #63, #64
• Build arm64 Docker images by @robomics in #65
• Update hictk dump to support dumping resolutions, cells and normalizations by @robomics in #62
• Improve hictk zoomify by @robomics in #66
• Update build-dockerfile workflow to test image after build by @robomics in #67
• Implement ICE balancing by @robomics in #11
• Implement hictk fix-mcool by @robomics in #68
• Add docs by @robomics in #69
• Update README and docs by @robomics in #71
• Fix segfault by @robomics in #72
• Prepare for v0.0.3 by @robomics in #73

New Contributors

• @dependabot made their first contribution in #55

Full Changelog: v0.0.2...v0.0.3

v0.0.2

What's Changed

• Reduce memory usage when reading .hic8 files by @robomics in #49
• Improve performance when reading hic files by @robomics in #50

Full Changelog: v0.0.1...v0.0.2

v0.0.1

Update fuzzy_test.py