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Bump mambaorg/micromamba from 1.4.3 to 2.0.4 in /containers #126

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Bump mambaorg/micromamba from 1.4.3 to 2.0.4 in /containers
Bumps mambaorg/micromamba from 1.4.3 to 2.0.4.

---
updated-dependencies:
- dependency-name: mambaorg/micromamba
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
  • Loading branch information
dependabot[bot] authored Nov 26, 2024
commit 62ad9493eceec32dd3950fde453de85b2dbb1888
2 changes: 1 addition & 1 deletion containers/cluster-profiler__v4.8.1.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/comparative-analysis__v1.0.0.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/cooltools__v0.5.4.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/dchic__vd4eb244.Dockerfile
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Expand Up @@ -30,7 +30,7 @@ RUN apt-get update \
&& chmod 755 dchic/dchicf.r


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/diff-expression-analysis__v1.0.0.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/diffdomain__v1c4b3db.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ RUN apt-get update \
&& find diffdomain -type f -exec chmod uga+r {} + \
&& find diffdomain -type d -exec chmod uga+rx {} +

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/hic-balancing__v1.0.1.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -61,7 +61,7 @@ RUN cd /tmp/hic2cool-ng*/ \
&& cmake --install build


FROM mambaorg/micromamba:1.5.8-jammy AS base
FROM mambaorg/micromamba:1.5.10-jammy AS base

ARG CONTAINER_TITLE
ARG CONTAINER_VERSION
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4 changes: 2 additions & 2 deletions containers/hic-breakfinder__v30a0dcc.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS builder
FROM mambaorg/micromamba:2.0.4 AS builder

ARG CONTAINER_VERSION

Expand Down Expand Up @@ -33,7 +33,7 @@ RUN cd hic_breakfinder \
&& make -j $(nproc)


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/hicexplorer__v3.7.2.Dockerfile
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Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/hictrans__ve26ad6a.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ RUN apt-get update \
&& git checkout "$HICTRANS_VERSION"


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/hint__v2.2.8.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ RUN apt-get update \
&& curl -L "$BICSEQ2_SEG_URL" | tar -xzf -


FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/image-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION

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2 changes: 1 addition & 1 deletion containers/macs2__v2.2.9.1.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
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2 changes: 1 addition & 1 deletion containers/maxhic__vb553b8f.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ RUN apt-get update \

RUN if [ -z "$CONTAINER_VERSION" ]; then echo "Missing CONTAINER_VERSION --build-arg" && exit 1; fi

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/microarray-analysis__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/plotting__v1.0.0.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/pyutils__v1.0.1.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG MAMBA_DOCKERFILE_ACTIVATE=1

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2 changes: 1 addition & 1 deletion containers/seqkit__v2.5.1.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
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2 changes: 1 addition & 1 deletion containers/wiggletools__v1.2.11.Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
#
# SPDX-License-Identifier: MIT

FROM mambaorg/micromamba:1.4.3 AS base
FROM mambaorg/micromamba:2.0.4 AS base

ARG CONTAINER_VERSION
ARG MAMBA_DOCKERFILE_ACTIVATE=1
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