Skip to content

BUG: read_parquet fails for hdfs:// files with latest fsspec #50639

Closed
@f4hy

Description

@f4hy

Pandas version checks

  • I have checked that this issue has not already been reported.

  • I have confirmed this bug exists on the latest version of pandas.

  • I have confirmed this bug exists on the main branch of pandas.

Reproducible Example

# fsspec==2022.8.2
df = pd.read_parquet("hdfs:///path/to/myfile.parquet") #works
# fsspec==2022.11.0
df = pd.read_parquet("hdfs:///path/to/myfile.parquet") #errors
# OSError: only valid on seekable files

Issue Description

fsspec has changed the backend for hdfs to use the new filesystem in pyarrow in 2022.10.0. This seems to break compatibility with pandas as this apparently gives back a non seekable file now which pandas expects.

One solution could be to have pandas require fsspec<=2022.8.2 which is the last version which worked.

Another option would be to look upstream to fsspec and have them guarantee a seekable filehandle.

A third would be to modify the pandas reader to detect a non seekable filehandle and buffer the file.

Expected Behavior

read_parquet should continue to work with hdfs remote files as it did with earlier versions of the fsspec dependency

Installed Versions

INSTALLED VERSIONS

commit : 8dab54d
python : 3.8.13.final.0
python-bits : 64
OS : Linux
OS-release : 5.4.0-77-generic
Version : #86~18.04.1-Ubuntu SMP Fri Jun 18 01:23:22 UTC 2021
machine : x86_64
processor : x86_64
byteorder : little
LC_ALL : None
LANG : None
LOCALE : None.None

pandas : 1.5.2
numpy : 1.24.1
pytz : 2022.7
dateutil : 2.8.2
setuptools : 51.3.3
pip : 20.3.4
Cython : None
pytest : None
hypothesis : None
sphinx : None
blosc : None
feather : None
xlsxwriter : None
lxml.etree : None
html5lib : None
pymysql : None
psycopg2 : None
jinja2 : None
IPython : 7.26.0
pandas_datareader: None
bs4 : None
bottleneck : None
brotli : None
fastparquet : None
fsspec : 2022.11.0
gcsfs : None
matplotlib : None
numba : None
numexpr : None
odfpy : None
openpyxl : None
pandas_gbq : None
pyarrow : 10.0.1
pyreadstat : None
pyxlsb : None
s3fs : None
scipy : None
snappy : None
sqlalchemy : None
tables : None
tabulate : None
xarray : None
xlrd : None
xlwt : None
zstandard : None
tzdata : None

Metadata

Metadata

Assignees

No one assigned

    Labels

    IO Parquetparquet, featherUpstream issueIssue related to pandas dependency

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions