Sequence Bloom Tree with Pod5 Inputs

Project Overview

This project implements a Sequence Bloom Tree (SBT) with a custom rawhash method for processing pod5 sequencing data.

Setup

1. Create a virtual environment
2. Install dependencies: pip install -r requirements.txt

Key Components

• rawhash.py: Custom hash method for pod5 inputs
• sequence_bloom_tree.py: Core SBT implementation
• dummy_data/: Directory containing dummy pod5 files for testing