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Commits on Dec 7, 2020

• [NEWS] Revamp of bcftools call -G

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Commits on Feb 20, 2020

• Use #include <assert.h> in source files that use assert()

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Commits on Apr 28, 2017

• Fix samtools#599

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Commits on Oct 1, 2015

• vcfcall: gvcf calling not working with -c calling mode yet

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Commits on Nov 7, 2014

• Calling improvements:

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Commits on Oct 21, 2014

• call -c now supports -f GQ

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Commits on Oct 8, 2014

• DPR trimmed with call -c

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Commits on Aug 14, 2014

• Canonicalise whitespace -- USE -b/-w TO DIFF/BLAME ACROSS THIS COMMIT

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Commits on Aug 13, 2014

• Reformat license text

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• Add previously-omitted copyright notices

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Commits on Apr 22, 2014

• call: First step towards revised -m calling (include a prior).

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Commits on Apr 1, 2014

• call -c print AF2 header line

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• Added copyright notice

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Commits on Feb 17, 2014

• Make int size explicit for bcf_get_*_int calls

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Commits on Nov 19, 2013

• call: Average MQ annotation; filter: allow both TAG and INFO/TAG in filters

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Commits on Oct 9, 2013

• filter: preliminary steps towards SnpGap and IndelGap filter; Updated to the latest htslib API

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Commits on Oct 1, 2013

• call: Original bcftools' -c calling now functional

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