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Commits on Feb 4, 2021

• Update Makefile dependencies; include <strings.h> directly where needed

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Commits on Jan 27, 2021

• Use hts_[sl]rand() functions instead of introducing PCG. Reverts and replaces 61bab75.

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Commits on Jan 25, 2021

• Switch to PCG to ensure test reproducibility across platforms

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Commits on Jan 22, 2021

• Add new +prune -N, --nsites-per-win-mode mode. Resolves samtools#1050

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Commits on May 11, 2020

• [NEWS] Extend +prune to allow annotating with various LD metrics,

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Commits on Feb 20, 2020

• Use #include <assert.h> in source files that use assert()

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Commits on Apr 18, 2019

• Allow duplicate positions in both VCF and the TAB file with call -C alleles. Fixes samtools#915

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Commits on Mar 6, 2019

• New +remove-overlaps plugin. Resolves samtools#974

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Commits on Jun 12, 2017

• Add new buffering functionality by overlap to vcfbuf

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Commits on May 17, 2017

• New +prune plugin

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