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Commits on Mar 11, 2024

• Use a common makefile

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  rwk-unil

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  35388eb

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Commits on Mar 7, 2024

• fix xcf

  srubinacci

  committed
  d13c7a9

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• Merge branch 'main' of https://github.com/odelaneau/shapeit5.git into

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  srubinacci

  committed
  4ea27f7

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• xcf fix writeHeader

  srubinacci

  committed
  24c24c4

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Commits on Jul 25, 2023

• fix contig

  srubinacci

  committed
  2c9e551

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Commits on May 8, 2023

• Fix multiple bugs + v5.1.1

  odelaneau

  committed
  990ed0d

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Commits on Apr 12, 2023

• Update documentation of phase_common

  odelaneau

  committed
  877b1dc

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Commits on Mar 31, 2023

• Update doc + release

  odelaneau

  committed
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Commits on Mar 27, 2023

• Clean-ups

  odelaneau

  committed
  0f164b8

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Commits on Mar 24, 2023

• Add chromosome X support in phase_[common/rare]

  odelaneau

  committed
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Commits on Mar 23, 2023

• Add maps and chunks resources

  odelaneau

  committed
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Commits on Mar 22, 2023

• Renaming rare_genotype to sparse_genotype

  odelaneau

  committed
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Commits on Mar 18, 2023

• Integration of xcf in phase_[common/rare]

  odelaneau

  committed
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Commits on Mar 15, 2023

• adding xcftools

  odelaneau

  committed
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Commits on Mar 11, 2023

• Fix small ligate scaffold bugs

  odelaneau

  committed
  429adde

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• Adapt ligate for PED file

  odelaneau

  committed
  c232774

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Commits on Mar 9, 2023

• Merge branch 'main' of github.com:odelaneau/shapeit5 into main

  odelaneau

  committed
  9286953

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• Major update

  odelaneau

  committed
  7e52b56

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Commits on Feb 8, 2023

• update docs, v1.0.0, chunking, pipeline

  RJHFMSTR

  committed
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Commits on Dec 23, 2022

• Fix xompilation issue

  odelaneau

  committed
  9666754

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Commits on Dec 9, 2022

• Bugfix & better reporting (high missing/common variants)

  

  Simone Rubinacci

  committed
  8213e44

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Commits on Dec 6, 2022

• small edit

  odelaneau

  committed
  2e359fd

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• makefile_static_robin_desktop

  RJHFMSTR

  committed
  8ff4836

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• update_MAX_OVERLAP_HETS

  RJHFMSTR

  committed
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Commits on Nov 4, 2022

• [Minor] Made assignment in "if" statement explicit with parentheses

  rwk-unil

  committed
  9185f49

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• [Fix] Fixed abusive usage of "using" directive

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  rwk-unil

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  0f65ee2

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• Replaced duplicated files by symlinks

  rwk-unil

  committed
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• Uniformized all "utils" files

  rwk-unil

  committed
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Commits on Oct 16, 2022

• Final commit

  odelaneau

  committed
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Commits on Oct 14, 2022

• Merge branch 'main' of https://github.com/odelaneau/shapeit5.git into main

  

  Simone Rubinacci

  committed
  f2ea6a9

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• Copyright update

  

  Simone Rubinacci

  committed
  9dbf127

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• Fix IBD2 issue

  odelaneau

  committed
  07b70bb

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Commits on Aug 30, 2022

• Fix release commit/date labeling + remove singleton in calibration computations

  odelaneau

  committed
  4bb1244

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Commits on Aug 26, 2022

• Fix another bug in switch calibration

  odelaneau

  committed
  8d5a513

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Commits on Aug 25, 2022

• Fix bug in switch calibration

  odelaneau

  committed
  22e5276

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