GLIMPSE Tools

Versions

Current Release: 1.1.1. Release date: May 21, 2021

For details of past changes please see CHANGELOG.

License

GLIMPSE is available under a MIT license. For more information please see the LICENSE.

Features

GLIMPSE is a set of tools for phasing and imputation for low-coverage sequencing datasets:

• GLIMPSE_chunk splits the genome into chunks ready for imputation/phasing
• GLIMPSE_phase phases & imputes low coverage sequencing data
• GLIMPSE_ligate concatenates phased chunks of data into chromosome wide files
• GLIMPSE_sample allows sampling plausible haplotype configurations from the files

Documentation and tutorials

Please visit our website for tutorials, documentation and installation instructions:

https://odelaneau.github.io/GLIMPSE/