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Update manifest with h5n1-cattle-outbreak segments #957

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merged 1 commit into from
Jul 25, 2024

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@jameshadfield jameshadfield commented Jul 25, 2024

See nextstrain/avian-flu#69 and nextstrain/avian-flu#72 for details of the new datasets themselves.

Segments ordered following the other avian-flu builds in the manifest, although note that this order differs from the canonical order of "pb2", "pb1", "pa", "ha","np", "na", "mp", "ns" which is used to order segments in the avian-flu/h5n1-cattle-outbreak/genome build.

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  • Deployment of underlying datasets to nextstrain-data

Checklist

See <nextstrain/avian-flu#69> and
<nextstrain/avian-flu#72> for details of the new
datasets themselves.

Segments ordered following the other avian-flu builds in the manifest,
although note that this order differs from the canonical order of
"pb2", "pb1", "pa", "ha","np", "na", "mp", "ns" which is used to order
segments in the avian-flu/h5n1-cattle-outbreak/genome build.
@nextstrain-bot nextstrain-bot temporarily deployed to nextstrain-s-james-avia-ffoim5 July 25, 2024 05:00 Inactive
@jameshadfield jameshadfield merged commit b73f5c2 into master Jul 25, 2024
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@jameshadfield jameshadfield deleted the james/avian-flu-manifest branch July 25, 2024 05:18
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Noticed a typo. I'll make a separate PR and merge it since I plan to promote changes to nextstrain.org soon.

data/manifest_core.json Show resolved Hide resolved
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3 participants