Skip to content

Commit

Permalink
Exclude overdiverged Italian sequences
Browse files Browse the repository at this point in the history
  • Loading branch information
corneliusroemer committed Jan 19, 2024
1 parent e0b2f67 commit 2302704
Show file tree
Hide file tree
Showing 2 changed files with 28 additions and 0 deletions.
14 changes: 14 additions & 0 deletions nextclade/resources/exclude_accessions.txt
Original file line number Diff line number Diff line change
Expand Up @@ -166,3 +166,17 @@ OQ547772
OP605564

OR464204 # MPXV_USA_2022_OH0008 splits B.1.4

PP098612 # Italy/Campania overdiverged, version .1
PP098592 # Italy/Campania overdiverged, version .1
PP098584 # Italy/Campania overdiverged, version .1
PP098601 # Italy/Campania overdiverged, version .1
PP098604 # Italy/Campania overdiverged, version .1
PP098613 # Italy/Campania overdiverged, version .2
PP098593 # Italy/Campania overdiverged, version .2
PP098605 # Italy/Campania overdiverged, version .2
PP098614 # Italy/Campania overdiverged, version .2
PP098587 # Italy/Campania overdiverged, version .2
PP098582 # Italy/Campania overdiverged, version .2
PP098610 # Italy/Campania overdiverged, version .2
PP098599 # Italy/Campania overdiverged, version .2
14 changes: 14 additions & 0 deletions phylogenetic/config/exclude_accessions.txt
Original file line number Diff line number Diff line change
Expand Up @@ -56,3 +56,17 @@ OQ621553 # Monkeypox virus isolate MPXV/Sudan/2022/RKI630, many insertions, clad
OQ581847 # Spain, B.1.10, overdiverged
OQ581850 # Spain, B.1.10, overdiverged
OR540671 # Slovenia, overdiverged

PP098612 # Italy/Campania overdiverged, version .1
PP098592 # Italy/Campania overdiverged, version .1
PP098584 # Italy/Campania overdiverged, version .1
PP098601 # Italy/Campania overdiverged, version .1
PP098604 # Italy/Campania overdiverged, version .1
PP098613 # Italy/Campania overdiverged, version .2
PP098593 # Italy/Campania overdiverged, version .2
PP098605 # Italy/Campania overdiverged, version .2
PP098614 # Italy/Campania overdiverged, version .2
PP098587 # Italy/Campania overdiverged, version .2
PP098582 # Italy/Campania overdiverged, version .2
PP098610 # Italy/Campania overdiverged, version .2
PP098599 # Italy/Campania overdiverged, version .2

0 comments on commit 2302704

Please sign in to comment.