Skip to content

Navigation Menu

Appearance settings

View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  Accelerator
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

nanoporetech / medaka Public

Notifications You must be signed in to change notification settings
Fork 87
Star 488

Code
Issues 27
Pull requests 3
Actions
Security
Insights

Additional navigation options

Code
Issues
Pull requests
Actions
Security
Insights

Pull requests: nanoporetech/medaka

Labels 10 Milestones 0

Labels 10 Milestones 0

New pull request New

3 Open 31 Closed

3 Open 31 Closed

Author

Filter by author

Loading

Uh oh!

There was an error while loading. Please reload this page.

Label

Filter by label

Loading

Uh oh!

There was an error while loading. Please reload this page.

Use alt + click/return to exclude labels

or ⇧ + click/return for logical OR

Projects

Filter by project

Loading

Uh oh!

There was an error while loading. Please reload this page.

Milestones

Filter by milestone

Loading

Uh oh!

There was an error while loading. Please reload this page.

Reviews

Filter by reviews

No reviews Review required Approved review Changes requested

Assignee

Filter by who’s assigned

Assigned to nobody

Loading

Uh oh!

There was an error while loading. Please reload this page.

Sort

Sort by

Newest Oldest Most commented Least commented Recently updated Least recently updated Best match

Most reactions

Pull requests list

Update README.md

#579 opened Dec 6, 2025 by fischuu

Loading…

Add option to specify output prefix for consensus file

#571 opened Aug 25, 2025 by TejusK123

Loading…

Fix medaka not detecting samtools

#550 opened Jan 18, 2025 by zwets

Loading…

ProTip! What’s not been updated in a month: updated:<2025-11-10.

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.