Unable to install plugins that depend on nokogiri in Vagrant 1.6+

[lox]

Since installing Vagrant 1.6.0, I'm unable to install landrush, or other plugins that depend on nokogiri:

I initially thought this was a landrush issue, but have reproduced with other vagrant plugins:

vagrant-landrush/landrush#69

I tested 1.6.1 and 1.6.2, both of which fail the same way. Reverting to 1.5.4 fixes the problem.

[mitchellh]

Could you share the logs? The underlying installer foundation didn't change at all between 1.5 and 1.6, which makes this odd.

[lox]

Which logs shall I include? The landrush bug has a trace of the output. It's certainly strange, in that I'm sure it's been working fine for several days, but suddenly today our CI system and my own installation started to have the same issue. Entirely possible it's a bug elsewhere.

[AlexeyPopov]

I have same error with "vagrant plugin update" command.

Error log:

Bundler, the underlying system Vagrant uses to install plugins,
reported an error. The error is shown below. These errors are usually
caused by misconfigured plugin installations or transient network
issues. The error from Bundler is:

An error occurred while installing nokogiri (1.6.2), and Bundler cannot continue.
Make sure that gem install nokogiri -v '1.6.2' succeeds before bundling.

[jonbuffington]

Same issue here:

$ vagrant --version
Vagrant 1.6.2

$ vagrant plugin list
vagrant-login (1.0.1, system)
vagrant-share (1.0.1, system)
vagrant-vmware-fusion (2.4.1)

$ vagrant plugin update vagrant-vmware-fusion
Updating plugins: vagrant-vmware-fusion. This may take a few minutes...
Building nokogiri using packaged libraries.
Bundler, the underlying system Vagrant uses to install plugins,
reported an error. The error is shown below. These errors are usually
caused by misconfigured plugin installations or transient network
issues. The error from Bundler is:

An error occurred while installing nokogiri (1.6.2), and Bundler cannot continue.
Make sure that `gem install nokogiri -v '1.6.2'` succeeds before bundling.

[arosenhagen]

I run into this as well with vagrant 1.6.0, 1.6.1 and 1.6.2.
Downgrading to 1.5.4 helps (but well..not really ;-))

$ vagrant plugin install vagrant-omnibus
Installing the 'vagrant-omnibus' plugin. This can take a few minutes...
Building nokogiri using packaged libraries.
Building libxml2-2.8.0 for nokogiri with the following patches applied:
    - 0001-Fix-parser-local-buffers-size-problems.patch
    - 0002-Fix-entities-local-buffers-size-problems.patch
    - 0003-Fix-an-error-in-previous-commit.patch
    - 0004-Fix-potential-out-of-bound-access.patch
    - 0005-Detect-excessive-entities-expansion-upon-replacement.patch
    - 0006-Do-not-fetch-external-parsed-entities.patch
    - 0007-Enforce-XML_PARSER_EOF-state-handling-through-the-pa.patch
    - 0008-Improve-handling-of-xmlStopParser.patch
    - 0009-Fix-a-couple-of-return-without-value.patch
    - 0010-Keep-non-significant-blanks-node-in-HTML-parser.patch
    - 0011-Do-not-fetch-external-parameter-entities.patch
************************************************************************
IMPORTANT!  Nokogiri builds and uses a packaged version of libxml2.

If this is a concern for you and you want to use the system library
instead, abort this installation process and reinstall nokogiri as
follows:

    gem install nokogiri -- --use-system-libraries

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install

However, note that nokogiri does not necessarily support all versions
of libxml2.

For example, libxml2-2.9.0 and higher are currently known to be broken
and thus unsupported by nokogiri, due to compatibility problems and
XPath optimization bugs.
************************************************************************
Building libxslt-1.1.28 for nokogiri with the following patches applied:
    - 0001-Adding-doc-update-related-to-1.1.28.patch
    - 0002-Fix-a-couple-of-places-where-f-printf-parameters-wer.patch
    - 0003-Initialize-pseudo-random-number-generator-with-curre.patch
    - 0004-EXSLT-function-str-replace-is-broken-as-is.patch
    - 0006-Fix-str-padding-to-work-with-UTF-8-strings.patch
    - 0007-Separate-function-for-predicate-matching-in-patterns.patch
    - 0008-Fix-direct-pattern-matching.patch
    - 0009-Fix-certain-patterns-with-predicates.patch
    - 0010-Fix-handling-of-UTF-8-strings-in-EXSLT-crypto-module.patch
    - 0013-Memory-leak-in-xsltCompileIdKeyPattern-error-path.patch
    - 0014-Fix-for-bug-436589.patch
    - 0015-Fix-mkdir-for-mingw.patch
************************************************************************
IMPORTANT!  Nokogiri builds and uses a packaged version of libxslt.

If this is a concern for you and you want to use the system library
instead, abort this installation process and reinstall nokogiri as
follows:

    gem install nokogiri -- --use-system-libraries

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install
************************************************************************
Bundler, the underlying system Vagrant uses to install plugins,
reported an error. The error is shown below. These errors are usually
caused by misconfigured plugin installations or transient network
issues. The error from Bundler is:

An error occurred while installing nokogiri (1.6.2), and Bundler cannot continue.
Make sure that `gem install nokogiri -v '1.6.2'` succeeds before bundling.

[robsonpeixoto]

The same problem:

$ rm -rf ~/.vagrant.d
$ vagrant plugin update
Updating installed plugins...
Building nokogiri using packaged libraries.
Building libxml2-2.8.0 for nokogiri with the following patches applied:
    - 0001-Fix-parser-local-buffers-size-problems.patch
    - 0002-Fix-entities-local-buffers-size-problems.patch
    - 0003-Fix-an-error-in-previous-commit.patch
    - 0004-Fix-potential-out-of-bound-access.patch
    - 0005-Detect-excessive-entities-expansion-upon-replacement.patch
    - 0006-Do-not-fetch-external-parsed-entities.patch
    - 0007-Enforce-XML_PARSER_EOF-state-handling-through-the-pa.patch
    - 0008-Improve-handling-of-xmlStopParser.patch
    - 0009-Fix-a-couple-of-return-without-value.patch
    - 0010-Keep-non-significant-blanks-node-in-HTML-parser.patch
    - 0011-Do-not-fetch-external-parameter-entities.patch
************************************************************************
IMPORTANT!  Nokogiri builds and uses a packaged version of libxml2.

If this is a concern for you and you want to use the system library
instead, abort this installation process and reinstall nokogiri as
follows:

    gem install nokogiri -- --use-system-libraries

If you are using Bundler, tell it to use the option:

    bundle config build.nokogiri --use-system-libraries
    bundle install

However, note that nokogiri does not necessarily support all versions
of libxml2.

For example, libxml2-2.9.0 and higher are currently known to be broken
and thus unsupported by nokogiri, due to compatibility problems and
XPath optimization bugs.
************************************************************************
Bundler, the underlying system Vagrant uses to install plugins,
reported an error. The error is shown below. These errors are usually
caused by misconfigured plugin installations or transient network
issues. The error from Bundler is:

An error occurred while installing nokogiri (1.6.2), and Bundler cannot continue.
Make sure that `gem install nokogiri -v '1.6.2'` succeeds before bundling.

[arosenhagen]

FYI: this might be caused by the recent upgrade of the nokogiri gem to 1.6.2
A quick workaround would be to pin the nokogiri gem version.
Unfortunately I don't know where the gem is required/bundled by vagrant :-/

[arosenhagen]

Quick fix: add s.add_dependency(%q<nokogiri>, ["< 1.6.2"]) to ~/Applications/Vagrant/embedded/gems/specifications/vagrant-1.6.2.gemspec

[MisumiRize]

Installing nokogiri gem with system installed libxml2 is temporal solution for this issue.

1. Install libxml2 to system.
2. Run export NOKOGIRI_USE_SYSTEM_LIBRARIES=true.
3. Then try vagrant plugin update.

[fgrehm]

I've seen this happen when installing a pre-release version of vagrant-lxc and a user has just reported it as well.

Funny fact is that vagrant-lxc has no gem dependencies at all oO

[clarkbk]

Yep, I'm seeing this issue as well when attempting to install vmware_fusion /cc @josegonzalez

[clarkbk]

Confirmed that a downgrade works, though the export trick doesn't, and the s.add_dependency method doesn't work if you've deleted your .vagrant.d directory.

[clarkbk]

And now attempting to install vagrant-berkshelf in 1.5.4 also gives me the same error...

[mitchellh]

Ah, I wonder if this is caused by 1.6 adding the vagrant-windows dependencies which have a Nokogiri aspect.

[mitchellh]

/cc @sneal

[drpebcak]

I'm hitting this issue as well with vagrant-cachier, vagrant-omnibus, AND vagrant-hostsupdater

[gerritgg]

Downgrading to 1.5.4 doesn't work for me. After the downgrade when running vagrant plugin install vagrant-aws I still get the:

An error occurred while installing nokogiri (1.6.2), and Bundler cannot continue.
Make sure that `gem install nokogiri -v '1.6.2'` succeeds before bundling.

Is there another version you guys downgraded to? Also how do you delete the current installation, by just deleting the /Applications/Vagrant directory and the /usr/bin/vagrant binary?

[clarkbk]

After downgrading to 1.5.4 all my plugin reinstalls were working, except berkshelf. It was giving me that nokogiri error. It ended up working fine when I explicitly declared the plugin version in the install command:

This:

$ vagrant plugin install vagrant-berkshelf --plugin-version '>=2.0.1'

Not this:

$ vagrant plugin install vagrant-berkshelf

Maybe that will help you with vagrant-aws… or maybe not.

[mitchellh]

I believe this is actually caused by a recent Nokogiri update. Our build servers have recently failed to even build the Vagrant installers anymore because of this issue. I'll attempt to find a workaround.

[nodje]

Same problem here on a fresh Debian 7.5 install with Vagrant 1.6.2, trying to install vagrant-lxc

[yveslaroche]

It works now on my machine with the last Nokogiri update v1.6.2.1.

1.6.2.1 / 2014-05-13

Bug fixes

Fix statically-linked libxml2 installation when using universal builds of Ruby. sparklemotion/nokogiri#1104

Patching mini_portile to address the git dependency detailed in sparklemotion/nokogiri#1102

Library load fix to address segfault reported on some systems. sparklemotion/nokogiri#1097

[ncloward]

👍

[mitchellh]

Fixed for me too. I think this was a Nokogiri bug.

[clarkbk]

Another 👍

[tomav]

Same here, upgrading to 1.7.2 fixed the problem. Thank you @benjohnson77 & @obfuscurity

[arnlaugsson]

Updating to Vagrant 1.7.2 fixed it for me too.

~  ᐅ vagrant version
Installed Version: 1.7.2
Latest Version: 1.7.2

You're running an up-to-date version of Vagrant!
~  ᐅ vagrant plugin install vagrant-cachier
Installing the 'vagrant-cachier' plugin. This can take a few minutes...
Installed the plugin 'vagrant-cachier (1.2.0)'!

[hadifarnoud]

i still have this issue with vagrant 1.6.3 OSX 10.10.3 gem 2.4.6

I have tried ALL the above solutions. At last I edited nokogiri 1.6.2.1 gemspec in /Vagrant folder and modified the version to s.version = "1.6.6.2"

not sure this is going to mess up some things or not.

[fireproofsocks]

Having this problem with Vagrant 1.6.3 on Mac OS X 10.9.5, updating to Vagrant 1.7.2 fixed it.

[johnleetran]

upgrade to a newer version of vagrant OR

gem install --install-dir ~/.vagrant.d/gems nokogiri -v '1.6.3.1'

if you get another error like before run the same command on that package, for example

gem install --install-dir ~/.vagrant.d/gems dep_selector -v '1.0.3'

[jokeyrhyme]

I've had a great run with Vagrant, but I'm transitioning my projects to Docker now. Docker gets easier and easier to use each day, and it doesn't have any of the Ruby-to-C++ interface problems that Vagrant has. If you are having problems with Vagrant, give Docker a try.

[afilp]

@jokeyrhyme Is there a "VVV" equivalent in Docker?

[jokeyrhyme]

@af7 if you mean http://varyingvagrantvagrants.org/ , then I'm not sure. I did find this (but it seems incomplete): https://github.com/Varying-Vagrant-Vagrants/vvv-docker/tree/lkwdwrd

[johnleetran]

i still prefer vagrant because vagrant boxes are easier to destroy than docker containers/images. i am tired of doing a

docker rmi -f $(docker images -q)
docker rm -f $(docker ps -aq)

Boot2docker, pushing to a privately hosted docker repository is a pain in the butt.

Another pain point, docker caching for building new docker images is a subtle trap. We've been bitten by this several times in development.

[theninthnode]

Solution for me with Vagrant 1.6.3 on Mac was adding this to vagrant-1.6.3.gemspec like suggested above:

s.add_dependency(%q, ["< 1.6.3"])

[ryanotella]

I just had this error on vagrant 1.6.3 for nokogiri 1.6.6.2 when installing vagrant-cachier. But installing that version of nokogiri into ~/.vagrant.d/gems as per @johnleetran's suggestion solved it.

[damienalexandre]

On Ubuntu 15.10, I just had to install zlib1g-dev:

$ sudo apt install zlib1g-dev
$ vagrant plugin install vagrant-cachier
    Installing the 'vagrant-cachier' plugin. This can take a few minutes...
    Installed the plugin 'vagrant-cachier (1.2.1)'!

This is cleaner than installing an old version of nokogiri manually 😉

[Tyrael]

not everybody was having problem of building nokogiri because of the missing zlib1g-dev package ;)

[Donal-Flanagan]

I had the exact same issue on ubuntu 15.10, with vagrant 1.7.4. Installing the zlib1g-dev package worked perfectly. Thanks for the fix @damienalexandre

[tartley]

I also had the exact same issue on Ubuntu 15.10, with vagrant 1.7.4+dfsg-1_all (Ubuntu apt-get default version), but unlike @Donal-Flanagan, installing zlib1g-dev did not fix it for me. I then did a gem install nokogiri -v '1.6.7.2' (following the instructions in the error message Make sure that "gem install nokogiri -v '1.6.7.2'" succeeds...) and it did succeed, and after that, my vagrant plugin install... started working.

[Mathyn]

I had this issue today when trying to install the vagrant-triggers plugin with Ubuntu 14.04. When I tried to manually run gem install nokogiri -v '1.6.7.2' as suggested by the error output this also failed to install but did provide the helpful error message zlib is missing; necessary for building libxml2.

After installing zlib (sudo apt-get install zlib1g-dev) I could install nokogiri and with that install vagrant-triggers.

[avishnyakov]

Getting this while using vagrant-azure (https://github.com/Azure/vagrant-azure) on win10. Not sure what the resolution might be yet.

[gnufred]

I had the same problem on Ubuntu 16.04. Installing the latest version of Vagrant from their website fixed it for me.

[bhouston]

@Mathyn thanks for the suggestion:

After installing zlib (sudo apt-get install zlib1g-dev) I could install nokogiri and with that install vagrant-triggers.

On a fresh install of Ubuntu 16.04, running sudo apt-get install zlib1g-dev got lxc running for me. Sweet.

[andela-mallan]

Quick fix!
I run VAGRANT_DISABLE_STRICT_DEPENDENCY_ENFORCEMENT=1 vagrant plugin install vagrant-<name_of_plugin> and worked for me as a temporary solution.
Let me know if it helps.

[ghost]

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